Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 Z69720.1-201ENST00000601483 472 ntBASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TTC9CQ8N5M4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 OR6D1P-203ENST00000641209 4860 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 AC016396.2-201ENST00000562575 1417 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 IGHV3-52-201ENST00000519770 353 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 AL139327.4-201ENST00000612362 153 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 AL139384.1-201ENST00000612143 3047 ntBASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.85□□□□□ -0.19
TTC9CQ8N5M4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC233702.3-201ENST00000578656 1387 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC141586.5-201ENST00000624546 2050 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 LYSMD4-203ENST00000378904 2122 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 SIRPAP1-201ENST00000448467 1770 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 MIR1224-201ENST00000408193 85 ntBASIC13.84□□□□□ -0.19
TTC9CQ8N5M4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms