Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRRTM1Q86UE6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 MIR4785-201ENST00000585005 73 ntBASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.21■□□□□ 0.03
LRRTM1Q86UE6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRTM1Q86UE6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 AC128688.1-201ENST00000487626 519 ntBASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 AL512604.3-201ENST00000569583 964 ntBASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRTM1Q86UE6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms