Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.57■□□□□ 0.56
BRCC3P46736 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BRCC3P46736 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
BRCC3P46736 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BRCC3P46736 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 CRYGEP-201ENST00000412192 528 ntBASIC18.57■□□□□ 0.56
BRCC3P46736 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
BRCC3P46736 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.57■□□□□ 0.56
BRCC3P46736 AC040169.1-201ENST00000565382 521 ntBASIC18.57■□□□□ 0.56
BRCC3P46736 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
BRCC3P46736 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 GPR89P-201ENST00000407924 1495 ntBASIC18.57■□□□□ 0.56
BRCC3P46736 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 AL135999.2-201ENST00000622438 1686 ntBASIC18.57■□□□□ 0.56
BRCC3P46736 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRCC3P46736 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.57■□□□□ 0.56
BRCC3P46736 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BRCC3P46736 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
BRCC3P46736 LINC00304-203ENST00000565008 1864 ntBASIC18.56■□□□□ 0.56
BRCC3P46736 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.56■□□□□ 0.56
BRCC3P46736 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRCC3P46736 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
BRCC3P46736 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 YBX2P1-201ENST00000394192 760 ntBASIC18.56■□□□□ 0.56
BRCC3P46736 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
BRCC3P46736 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.56■□□□□ 0.56
BRCC3P46736 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.56■□□□□ 0.56
BRCC3P46736 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
BRCC3P46736 AC010327.4-202ENST00000591484 748 ntBASIC18.56■□□□□ 0.56
BRCC3P46736 AL139327.4-201ENST00000612362 153 ntBASIC18.56■□□□□ 0.56
BRCC3P46736 AL805961.1-202ENST00000641562 540 ntBASIC18.56■□□□□ 0.56
BRCC3P46736 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRCC3P46736 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRCC3P46736 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 AL390961.4-201ENST00000623958 2535 ntBASIC18.55■□□□□ 0.56
BRCC3P46736 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
BRCC3P46736 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.55■□□□□ 0.56
BRCC3P46736 VN2R19P-201ENST00000442399 1052 ntBASIC18.55■□□□□ 0.56
BRCC3P46736 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 AC018845.2-201ENST00000568326 409 ntBASIC18.55■□□□□ 0.56
BRCC3P46736 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.55■□□□□ 0.56
BRCC3P46736 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 AC055717.3-201ENST00000622967 595 ntBASIC18.55■□□□□ 0.56
BRCC3P46736 LINC01451-201ENST00000623792 534 ntBASIC18.55■□□□□ 0.56
BRCC3P46736 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.55■□□□□ 0.56
BRCC3P46736 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRCC3P46736 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
BRCC3P46736 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRCC3P46736 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.54■□□□□ 0.56
BRCC3P46736 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.54■□□□□ 0.56
BRCC3P46736 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCC3P46736 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCC3P46736 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
BRCC3P46736 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRCC3P46736 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRCC3P46736 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms