Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 AC004870.1-201ENST00000315132 882 ntBASIC15□□□□□ -0.01
TNFSF4P23510 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 TPM4P1-201ENST00000436100 807 ntBASIC15□□□□□ -0.01
TNFSF4P23510 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15□□□□□ -0.01
TNFSF4P23510 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15□□□□□ -0.01
TNFSF4P23510 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TNFSF4P23510 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TNFSF4P23510 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15□□□□□ -0.01
TNFSF4P23510 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.99□□□□□ -0.01
TNFSF4P23510 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.99□□□□□ -0.01
TNFSF4P23510 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.99□□□□□ -0.01
TNFSF4P23510 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TNFSF4P23510 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.99□□□□□ -0.01
TNFSF4P23510 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TNFSF4P23510 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TNFSF4P23510 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.98□□□□□ -0.01
TNFSF4P23510 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 SAPCD2P3-201ENST00000455031 850 ntBASIC14.98□□□□□ -0.01
TNFSF4P23510 AC002558.1-201ENST00000488906 803 ntBASIC14.98□□□□□ -0.01
TNFSF4P23510 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TNFSF4P23510 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.98□□□□□ -0.01
TNFSF4P23510 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 LINC01451-201ENST00000623792 534 ntBASIC14.98□□□□□ -0.01
TNFSF4P23510 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TNFSF4P23510 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms