Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.56□□□□□ -0.08
CTSDP07339 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CTSDP07339 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CTSDP07339 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.55□□□□□ -0.08
CTSDP07339 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CTSDP07339 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.55□□□□□ -0.08
CTSDP07339 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.55□□□□□ -0.08
CTSDP07339 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.55□□□□□ -0.08
CTSDP07339 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.55□□□□□ -0.08
CTSDP07339 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CTSDP07339 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CTSDP07339 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.54□□□□□ -0.08
CTSDP07339 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.54□□□□□ -0.08
CTSDP07339 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.54□□□□□ -0.08
CTSDP07339 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CTSDP07339 RPS2P55-201ENST00000397318 883 ntBASIC14.54□□□□□ -0.08
CTSDP07339 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.54□□□□□ -0.08
CTSDP07339 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 AC107956.1-201ENST00000494359 873 ntBASIC14.54□□□□□ -0.08
CTSDP07339 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.54□□□□□ -0.08
CTSDP07339 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 AC113410.3-201ENST00000623366 203 ntBASIC14.54□□□□□ -0.08
CTSDP07339 AC010653.2-201ENST00000623505 997 ntBASIC14.54□□□□□ -0.08
CTSDP07339 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CTSDP07339 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.54□□□□□ -0.08
CTSDP07339 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 AC093525.9-201ENST00000624961 1746 ntBASIC14.54□□□□□ -0.08
CTSDP07339 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.54□□□□□ -0.08
CTSDP07339 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CTSDP07339 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 CICP6-201ENST00000457191 2729 ntBASIC14.53□□□□□ -0.08
CTSDP07339 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CTSDP07339 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.53□□□□□ -0.08
CTSDP07339 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms