Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 AC069120.2-201ENST00000524091 540 ntBASIC22.77■■□□□ 1.24
COL5A2P05997 AC109635.5-201ENST00000533593 962 ntBASIC22.77■■□□□ 1.24
COL5A2P05997 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 COX11-202ENST00000571584 1108 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.77■■□□□ 1.24
COL5A2P05997 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC22.77■■□□□ 1.24
COL5A2P05997 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
COL5A2P05997 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
COL5A2P05997 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 WIZP1-201ENST00000531444 2299 ntBASIC22.76■■□□□ 1.23
COL5A2P05997 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL5A2P05997 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
COL5A2P05997 MRPS18AP1-201ENST00000414458 589 ntBASIC22.76■■□□□ 1.23
COL5A2P05997 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.76■■□□□ 1.23
COL5A2P05997 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.76■■□□□ 1.23
COL5A2P05997 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC22.76■■□□□ 1.23
COL5A2P05997 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.76■■□□□ 1.23
COL5A2P05997 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.76■■□□□ 1.23
COL5A2P05997 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
COL5A2P05997 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
COL5A2P05997 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.76■■□□□ 1.23
COL5A2P05997 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL5A2P05997 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
COL5A2P05997 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL5A2P05997 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.75■■□□□ 1.23
COL5A2P05997 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.75■■□□□ 1.23
COL5A2P05997 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.75■■□□□ 1.23
COL5A2P05997 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL5A2P05997 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL5A2P05997 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
COL5A2P05997 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.74■■□□□ 1.23
COL5A2P05997 UXT-AS1-201ENST00000590504 1525 ntBASIC22.74■■□□□ 1.23
COL5A2P05997 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC22.74■■□□□ 1.23
COL5A2P05997 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.74■■□□□ 1.23
COL5A2P05997 AC097493.3-201ENST00000509725 367 ntBASIC22.74■■□□□ 1.23
COL5A2P05997 AC005412.3-201ENST00000580309 715 ntBASIC22.74■■□□□ 1.23
COL5A2P05997 SPDYE22P-201ENST00000582158 798 ntBASIC22.74■■□□□ 1.23
COL5A2P05997 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
COL5A2P05997 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
COL5A2P05997 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
COL5A2P05997 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL5A2P05997 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.74■■□□□ 1.23
COL5A2P05997 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.74■■□□□ 1.23
COL5A2P05997 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.73■■□□□ 1.23
COL5A2P05997 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 AC004890.2-204ENST00000481968 304 ntBASIC22.73■■□□□ 1.23
COL5A2P05997 SERBP1P5-201ENST00000510079 1181 ntBASIC22.73■■□□□ 1.23
COL5A2P05997 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.73■■□□□ 1.23
COL5A2P05997 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.73■■□□□ 1.23
COL5A2P05997 AL139327.4-201ENST00000612362 153 ntBASIC22.73■■□□□ 1.23
COL5A2P05997 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.73■■□□□ 1.23
COL5A2P05997 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.73■■□□□ 1.23
COL5A2P05997 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL5A2P05997 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.73■■□□□ 1.23
COL5A2P05997 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms