Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 AC011676.5-201ENST00000624864 2660 ntBASIC17.43■□□□□ 0.38
CAPNS1P04632 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 AL035633.1-201ENST00000406139 838 ntBASIC17.43■□□□□ 0.38
CAPNS1P04632 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPNS1P04632 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.43■□□□□ 0.38
CAPNS1P04632 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 MTDHP3-201ENST00000594186 672 ntBASIC17.43■□□□□ 0.38
CAPNS1P04632 AC024563.2-201ENST00000603282 481 ntBASIC17.43■□□□□ 0.38
CAPNS1P04632 Z83851.2-201ENST00000609564 659 ntBASIC17.43■□□□□ 0.38
CAPNS1P04632 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CAPNS1P04632 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CAPNS1P04632 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPNS1P04632 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CAPNS1P04632 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 AC112777.1-201ENST00000540175 1423 ntBASIC17.42■□□□□ 0.38
CAPNS1P04632 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 FAM8A3P-201ENST00000427218 844 ntBASIC17.42■□□□□ 0.38
CAPNS1P04632 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.42■□□□□ 0.38
CAPNS1P04632 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.42■□□□□ 0.38
CAPNS1P04632 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPNS1P04632 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.42■□□□□ 0.38
CAPNS1P04632 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CAPNS1P04632 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CAPNS1P04632 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CAPNS1P04632 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPNS1P04632 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 AL121761.2-201ENST00000598007 1648 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CAPNS1P04632 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.41■□□□□ 0.38
CAPNS1P04632 RCN1P2-201ENST00000398357 915 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 RNA5SP415-201ENST00000517246 115 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 AC012640.2-201ENST00000561606 901 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 MIR3180-4-201ENST00000582223 153 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPNS1P04632 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.41■□□□□ 0.38
CAPNS1P04632 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CAPNS1P04632 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CAPNS1P04632 KRT89P-201ENST00000620027 1478 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 AL109659.2-201ENST00000606809 1674 ntBASIC17.41■□□□□ 0.38
CAPNS1P04632 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CAPNS1P04632 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
CAPNS1P04632 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CAPNS1P04632 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CAPNS1P04632 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CAPNS1P04632 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CAPNS1P04632 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms