Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC3P02656 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC3P02656 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC3P02656 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOC3P02656 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC3P02656 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 TSPY23P-201ENST00000440136 739 ntBASIC14.06□□□□□ -0.16
APOC3P02656 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 AC079781.5-202ENST00000641784 3743 ntBASIC14.06□□□□□ -0.16
APOC3P02656 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC3P02656 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC3P02656 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOC3P02656 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.05□□□□□ -0.16
APOC3P02656 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APOC3P02656 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APOC3P02656 AC022532.1-201ENST00000624563 1728 ntBASIC14.05□□□□□ -0.16
APOC3P02656 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.05□□□□□ -0.16
APOC3P02656 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.05□□□□□ -0.16
APOC3P02656 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APOC3P02656 MYO15B-237ENST00000642007 4893 ntBASIC14.05□□□□□ -0.16
APOC3P02656 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 PCDHA3-202ENST00000532566 4594 ntBASIC14.05□□□□□ -0.16
APOC3P02656 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC3P02656 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC3P02656 AC007686.3-201ENST00000619017 3487 ntBASIC14.05□□□□□ -0.16
APOC3P02656 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC3P02656 AC023908.3-201ENST00000564211 3047 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms