Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CBX6O95503 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CBX6O95503 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX6O95503 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CBX6O95503 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CBX6O95503 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX6O95503 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CBX6O95503 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 AL353719.1-201ENST00000566847 864 ntBASIC17.49■□□□□ 0.39
CBX6O95503 AC140113.3-201ENST00000605663 199 ntBASIC17.49■□□□□ 0.39
CBX6O95503 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.49■□□□□ 0.39
CBX6O95503 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 LINC01126-201ENST00000623515 1646 ntBASIC17.49■□□□□ 0.39
CBX6O95503 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.49■□□□□ 0.39
CBX6O95503 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CBX6O95503 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.49■□□□□ 0.39
CBX6O95503 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 AC009102.3-201ENST00000623118 1491 ntBASIC17.49■□□□□ 0.39
CBX6O95503 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CBX6O95503 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CBX6O95503 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 LINC00554-201ENST00000564841 3011 ntBASIC17.48■□□□□ 0.39
CBX6O95503 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX6O95503 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CBX6O95503 AC034236.2-201ENST00000606662 1610 ntBASIC17.48■□□□□ 0.39
CBX6O95503 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.48■□□□□ 0.39
CBX6O95503 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.48■□□□□ 0.39
CBX6O95503 AL671277.2-201ENST00000458060 996 ntBASIC17.48■□□□□ 0.39
CBX6O95503 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.48■□□□□ 0.39
CBX6O95503 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.48■□□□□ 0.39
CBX6O95503 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CBX6O95503 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 AC079328.2-201ENST00000561241 3354 ntBASIC17.48■□□□□ 0.39
CBX6O95503 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CBX6O95503 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX6O95503 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.48■□□□□ 0.39
CBX6O95503 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CBX6O95503 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CBX6O95503 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.48■□□□□ 0.39
CBX6O95503 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 CROCCP1-201ENST00000426910 5675 ntBASIC17.47■□□□□ 0.39
CBX6O95503 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CBX6O95503 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CBX6O95503 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CBX6O95503 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CBX6O95503 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 AC116407.4-201ENST00000623319 1061 ntBASIC17.47■□□□□ 0.39
CBX6O95503 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.47■□□□□ 0.39
CBX6O95503 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CBX6O95503 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CBX6O95503 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 AL163051.1-201ENST00000569214 1512 ntBASIC17.47■□□□□ 0.39
CBX6O95503 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.47■□□□□ 0.39
CBX6O95503 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CBX6O95503 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms