Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.4■□□□□ 0.22
HCN1O60741 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
HCN1O60741 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HCN1O60741 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.39■□□□□ 0.22
HCN1O60741 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HCN1O60741 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HCN1O60741 TSPY12P-201ENST00000421279 868 ntBASIC16.39■□□□□ 0.21
HCN1O60741 IGHV3-47-201ENST00000425060 335 ntBASIC16.39■□□□□ 0.21
HCN1O60741 FOSL1P1-201ENST00000511041 816 ntBASIC16.39■□□□□ 0.21
HCN1O60741 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.39■□□□□ 0.21
HCN1O60741 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HCN1O60741 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCN1O60741 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HCN1O60741 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.39■□□□□ 0.21
HCN1O60741 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 LINC00167-201ENST00000530583 1419 ntBASIC16.38■□□□□ 0.21
HCN1O60741 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 AC026396.1-201ENST00000419388 421 ntBASIC16.38■□□□□ 0.21
HCN1O60741 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 KRT18P31-201ENST00000506277 1292 ntBASIC16.38■□□□□ 0.21
HCN1O60741 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.38■□□□□ 0.21
HCN1O60741 DUTP2-201ENST00000519164 463 ntBASIC16.38■□□□□ 0.21
HCN1O60741 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 AL353801.3-201ENST00000609898 542 ntBASIC16.38■□□□□ 0.21
HCN1O60741 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
HCN1O60741 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCN1O60741 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.38■□□□□ 0.21
HCN1O60741 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
HCN1O60741 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HCN1O60741 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCN1O60741 AD000864.1-201ENST00000624076 2295 ntBASIC16.37■□□□□ 0.21
HCN1O60741 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms