Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COCHO43405 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
COCHO43405 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COCHO43405 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COCHO43405 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
COCHO43405 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 LYSMD4-203ENST00000378904 2122 ntBASIC18.03■□□□□ 0.48
COCHO43405 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 RNA5SP416-201ENST00000516838 111 ntBASIC18.03■□□□□ 0.48
COCHO43405 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.03■□□□□ 0.48
COCHO43405 AC092865.5-201ENST00000545435 363 ntBASIC18.03■□□□□ 0.48
COCHO43405 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.03■□□□□ 0.48
COCHO43405 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.03■□□□□ 0.48
COCHO43405 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.03■□□□□ 0.48
COCHO43405 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.03■□□□□ 0.48
COCHO43405 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COCHO43405 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.03■□□□□ 0.48
COCHO43405 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.02■□□□□ 0.48
COCHO43405 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 BX842568.4-201ENST00000421222 227 ntBASIC18.02■□□□□ 0.48
COCHO43405 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.02■□□□□ 0.48
COCHO43405 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.02■□□□□ 0.48
COCHO43405 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.02■□□□□ 0.48
COCHO43405 MIR4751-201ENST00000578027 74 ntBASIC18.02■□□□□ 0.48
COCHO43405 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.02■□□□□ 0.48
COCHO43405 GPALPP1-207ENST00000611650 899 ntBASIC18.02■□□□□ 0.48
COCHO43405 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
COCHO43405 AC004790.2-201ENST00000623588 572 ntBASIC18.02■□□□□ 0.48
COCHO43405 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COCHO43405 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
COCHO43405 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.02■□□□□ 0.47
COCHO43405 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.02■□□□□ 0.47
COCHO43405 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.02■□□□□ 0.47
COCHO43405 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
COCHO43405 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COCHO43405 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COCHO43405 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COCHO43405 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.01■□□□□ 0.47
COCHO43405 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COCHO43405 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
COCHO43405 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COCHO43405 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.01■□□□□ 0.47
COCHO43405 AL590787.1-201ENST00000568856 1315 ntBASIC18.01■□□□□ 0.47
COCHO43405 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
COCHO43405 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COCHO43405 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COCHO43405 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
COCHO43405 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COCHO43405 AP002414.1-201ENST00000391405 1147 ntBASIC18.01■□□□□ 0.47
COCHO43405 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.01■□□□□ 0.47
COCHO43405 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.01■□□□□ 0.47
COCHO43405 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms