Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.18■□□□□ 0.34
CDC7O00311 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC7O00311 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDC7O00311 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
CDC7O00311 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC7O00311 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.18■□□□□ 0.34
CDC7O00311 AC246785.2-201ENST00000432512 513 ntBASIC17.18■□□□□ 0.34
CDC7O00311 AP002383.4-201ENST00000442518 975 ntBASIC17.18■□□□□ 0.34
CDC7O00311 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.18■□□□□ 0.34
CDC7O00311 AC122714.2-201ENST00000502787 707 ntBASIC17.18■□□□□ 0.34
CDC7O00311 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.18■□□□□ 0.34
CDC7O00311 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDC7O00311 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CDC7O00311 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 AL049757.1-201ENST00000616842 1596 ntBASIC17.18■□□□□ 0.34
CDC7O00311 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 KRT18P1-202ENST00000452408 1331 ntBASIC17.18■□□□□ 0.34
CDC7O00311 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.17■□□□□ 0.34
CDC7O00311 IER3-202ENST00000376377 1350 ntBASIC17.17■□□□□ 0.34
CDC7O00311 AC116353.5-201ENST00000638148 1699 ntBASIC17.17■□□□□ 0.34
CDC7O00311 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDC7O00311 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.17■□□□□ 0.34
CDC7O00311 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDC7O00311 FAM220CP-201ENST00000395253 831 ntBASIC17.17■□□□□ 0.34
CDC7O00311 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 KRT8P10-201ENST00000450021 1447 ntBASIC17.17■□□□□ 0.34
CDC7O00311 IGHV3-52-201ENST00000519770 353 ntBASIC17.17■□□□□ 0.34
CDC7O00311 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.17■□□□□ 0.34
CDC7O00311 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.17■□□□□ 0.34
CDC7O00311 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
CDC7O00311 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC7O00311 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC7O00311 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC7O00311 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC7O00311 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC7O00311 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC7O00311 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDC7O00311 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.16■□□□□ 0.34
CDC7O00311 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDC7O00311 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC7O00311 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.16■□□□□ 0.34
CDC7O00311 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC7O00311 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.16■□□□□ 0.34
CDC7O00311 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms