Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGB4Q9UN71 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB4Q9UN71 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB4Q9UN71 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB4Q9UN71 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGB4Q9UN71 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB4Q9UN71 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHGB4Q9UN71 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGB4Q9UN71 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGB4Q9UN71 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 AC142472.1-201ENST00000612013 1741 ntBASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.34■■□□□ 1.33
PCDHGB4Q9UN71 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGB4Q9UN71 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGB4Q9UN71 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGB4Q9UN71 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB4Q9UN71 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB4Q9UN71 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGB4Q9UN71 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L13-201ENST00000554103 1267 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L15-201ENST00000611059 1267 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L23-201ENST00000615195 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L24-201ENST00000617576 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L22-201ENST00000618238 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L20-201ENST00000619712 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L21-201ENST00000622058 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L10-201ENST00000622460 1267 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 DUX4L25-201ENST00000624915 1269 ntBASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGB4Q9UN71 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 DUSP8P4-201ENST00000399538 1761 ntBASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGB4Q9UN71 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 AC008813.1-201ENST00000536597 885 ntBASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGB4Q9UN71 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB4Q9UN71 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGB4Q9UN71 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGB4Q9UN71 AC092803.2-201ENST00000564287 1899 ntBASIC23.27■■□□□ 1.32
PCDHGB4Q9UN71 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHGB4Q9UN71 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
PCDHGB4Q9UN71 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGB4Q9UN71 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHGB4Q9UN71 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHGB4Q9UN71 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHGB4Q9UN71 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 AC133561.1-201ENST00000568600 2415 ntBASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 DUX4L11-201ENST00000611504 1267 ntBASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 DUX4L12-201ENST00000614593 1267 ntBASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 DUX4L14-201ENST00000621227 1267 ntBASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PCDHGB4Q9UN71 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGB4Q9UN71 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PCDHGB4Q9UN71 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGB4Q9UN71 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGB4Q9UN71 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms