Protein–RNA interactions for Protein: Q9NXE8

CWC25, Pre-mRNA-splicing factor CWC25 homolog, humanhuman

Predicted RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC25Q9NXE8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CWC25Q9NXE8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CWC25Q9NXE8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CWC25Q9NXE8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.77■■■□□ 2.52
CWC25Q9NXE8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.76■■■□□ 2.52
CWC25Q9NXE8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
CWC25Q9NXE8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
CWC25Q9NXE8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CWC25Q9NXE8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
CWC25Q9NXE8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.75■■■□□ 2.51
CWC25Q9NXE8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CWC25Q9NXE8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CWC25Q9NXE8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
CWC25Q9NXE8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CWC25Q9NXE8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.74■■■□□ 2.51
CWC25Q9NXE8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.74■■■□□ 2.51
CWC25Q9NXE8 BHLHE23-202ENST00000612929 1109 ntBASIC30.73■■■□□ 2.51
CWC25Q9NXE8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.73■■■□□ 2.51
CWC25Q9NXE8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CWC25Q9NXE8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
CWC25Q9NXE8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CWC25Q9NXE8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
CWC25Q9NXE8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.71■■■□□ 2.51
CWC25Q9NXE8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CWC25Q9NXE8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.71■■■□□ 2.51
CWC25Q9NXE8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.71■■■□□ 2.51
CWC25Q9NXE8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.7■■■□□ 2.51
CWC25Q9NXE8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.7■■■□□ 2.51
CWC25Q9NXE8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CWC25Q9NXE8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CWC25Q9NXE8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.69■■■□□ 2.5
CWC25Q9NXE8 AC010980.1-201ENST00000587192 1142 ntBASIC30.69■■■□□ 2.5
CWC25Q9NXE8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CWC25Q9NXE8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.69■■■□□ 2.5
CWC25Q9NXE8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CWC25Q9NXE8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CWC25Q9NXE8 AC139795.1-202ENST00000500444 432 ntBASIC30.68■■■□□ 2.5
CWC25Q9NXE8 AC074183.2-201ENST00000623112 922 ntBASIC30.68■■■□□ 2.5
CWC25Q9NXE8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CWC25Q9NXE8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CWC25Q9NXE8 AC142472.1-201ENST00000612013 1741 ntBASIC30.67■■■□□ 2.5
CWC25Q9NXE8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CWC25Q9NXE8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.66■■■□□ 2.5
CWC25Q9NXE8 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.66■■■□□ 2.5
CWC25Q9NXE8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.66■■■□□ 2.5
CWC25Q9NXE8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CWC25Q9NXE8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CWC25Q9NXE8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CWC25Q9NXE8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CWC25Q9NXE8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.49
CWC25Q9NXE8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CWC25Q9NXE8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.63■■■□□ 2.49
CWC25Q9NXE8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CWC25Q9NXE8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.63■■■□□ 2.49
CWC25Q9NXE8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
CWC25Q9NXE8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CWC25Q9NXE8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.61■■■□□ 2.49
CWC25Q9NXE8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
CWC25Q9NXE8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CWC25Q9NXE8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CWC25Q9NXE8 AP004609.3-201ENST00000610705 1884 ntBASIC30.6■■■□□ 2.49
CWC25Q9NXE8 PVT1_1.1-201ENST00000615125 194 ntBASIC30.6■■■□□ 2.49
CWC25Q9NXE8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.6■■■□□ 2.49
CWC25Q9NXE8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CWC25Q9NXE8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CWC25Q9NXE8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.59■■■□□ 2.49
CWC25Q9NXE8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.59■■■□□ 2.49
CWC25Q9NXE8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CWC25Q9NXE8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.58■■■□□ 2.49
CWC25Q9NXE8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CWC25Q9NXE8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CWC25Q9NXE8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CWC25Q9NXE8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.56■■■□□ 2.48
CWC25Q9NXE8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CWC25Q9NXE8 KRT8P33-201ENST00000508125 1423 ntBASIC30.56■■■□□ 2.48
CWC25Q9NXE8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
CWC25Q9NXE8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CWC25Q9NXE8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CWC25Q9NXE8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CWC25Q9NXE8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms