Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LONRF2P2-201ENST00000439212 571 ntBASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
SLC52A1Q9NWF4 RPS2P7-201ENST00000447334 885 ntBASIC35.64■■■■□ 3.3
SLC52A1Q9NWF4 Z92544.1-202ENST00000571933 1220 ntBASIC35.64■■■■□ 3.3
SLC52A1Q9NWF4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
SLC52A1Q9NWF4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC35.63■■■■□ 3.29
SLC52A1Q9NWF4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC35.63■■■■□ 3.29
SLC52A1Q9NWF4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
SLC52A1Q9NWF4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
SLC52A1Q9NWF4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC35.62■■■■□ 3.29
SLC52A1Q9NWF4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
SLC52A1Q9NWF4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.62■■■■□ 3.29
SLC52A1Q9NWF4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.62■■■■□ 3.29
SLC52A1Q9NWF4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 AC239859.2-201ENST00000444165 318 ntBASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.61■■■■□ 3.29
SLC52A1Q9NWF4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.6■■■■□ 3.29
SLC52A1Q9NWF4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
SLC52A1Q9NWF4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
SLC52A1Q9NWF4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
SLC52A1Q9NWF4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC35.6■■■■□ 3.29
SLC52A1Q9NWF4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
SLC52A1Q9NWF4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC35.59■■■■□ 3.29
SLC52A1Q9NWF4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
SLC52A1Q9NWF4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC35.59■■■■□ 3.29
SLC52A1Q9NWF4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
SLC52A1Q9NWF4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
SLC52A1Q9NWF4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC35.58■■■■□ 3.29
SLC52A1Q9NWF4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.28
SLC52A1Q9NWF4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
SLC52A1Q9NWF4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
SLC52A1Q9NWF4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
SLC52A1Q9NWF4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.56■■■■□ 3.28
SLC52A1Q9NWF4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC35.55■■■■□ 3.28
SLC52A1Q9NWF4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
SLC52A1Q9NWF4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC35.54■■■■□ 3.28
SLC52A1Q9NWF4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC35.53■■■■□ 3.28
SLC52A1Q9NWF4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
SLC52A1Q9NWF4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
SLC52A1Q9NWF4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
SLC52A1Q9NWF4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC35.52■■■■□ 3.28
SLC52A1Q9NWF4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC35.51■■■■□ 3.28
SLC52A1Q9NWF4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC35.51■■■■□ 3.27
SLC52A1Q9NWF4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
SLC52A1Q9NWF4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
SLC52A1Q9NWF4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC35.49■■■■□ 3.27
SLC52A1Q9NWF4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SLC52A1Q9NWF4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC35.48■■■■□ 3.27
SLC52A1Q9NWF4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SLC52A1Q9NWF4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SLC52A1Q9NWF4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
SLC52A1Q9NWF4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC35.47■■■■□ 3.27
SLC52A1Q9NWF4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
SLC52A1Q9NWF4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
SLC52A1Q9NWF4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC35.46■■■■□ 3.27
SLC52A1Q9NWF4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
SLC52A1Q9NWF4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
SLC52A1Q9NWF4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
SLC52A1Q9NWF4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC35.44■■■■□ 3.26
SLC52A1Q9NWF4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
SLC52A1Q9NWF4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC35.43■■■■□ 3.26
SLC52A1Q9NWF4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
SLC52A1Q9NWF4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC35.43■■■■□ 3.26
SLC52A1Q9NWF4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 AC022616.5-201ENST00000518796 181 ntBASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC35.42■■■■□ 3.26
SLC52A1Q9NWF4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC35.41■■■■□ 3.26
SLC52A1Q9NWF4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
SLC52A1Q9NWF4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC35.41■■■■□ 3.26
SLC52A1Q9NWF4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
SLC52A1Q9NWF4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SLC52A1Q9NWF4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC35.4■■■■□ 3.26
SLC52A1Q9NWF4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SLC52A1Q9NWF4 KRT18P10-201ENST00000388836 1287 ntBASIC35.4■■■■□ 3.26
SLC52A1Q9NWF4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC35.4■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms