Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 CHML-204ENST00000638121 920 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC42SE2Q9NRR3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 AC142381.3-201ENST00000568208 1670 ntBASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.7■□□□□ 0.26
CDC42SE2Q9NRR3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDC42SE2Q9NRR3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC42SE2Q9NRR3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDC42SE2Q9NRR3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42SE2Q9NRR3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42SE2Q9NRR3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42SE2Q9NRR3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 AC008813.1-201ENST00000536597 885 ntBASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42SE2Q9NRR3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 LINC01971-201ENST00000617888 1048 ntBASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42SE2Q9NRR3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 AC022211.4-201ENST00000625094 2161 ntBASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42SE2Q9NRR3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L13-201ENST00000554103 1267 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L15-201ENST00000611059 1267 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L23-201ENST00000615195 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L24-201ENST00000617576 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L22-201ENST00000618238 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L20-201ENST00000619712 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L21-201ENST00000622058 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L10-201ENST00000622460 1267 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 DUX4L25-201ENST00000624915 1269 ntBASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42SE2Q9NRR3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 AC148477.6-201ENST00000623746 465 ntBASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 MIR219A2-201ENST00000608502 1504 ntBASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42SE2Q9NRR3 AC096887.2-201ENST00000623443 1957 ntBASIC16.62■□□□□ 0.25
CDC42SE2Q9NRR3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CDC42SE2Q9NRR3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.62■□□□□ 0.25
CDC42SE2Q9NRR3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDC42SE2Q9NRR3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDC42SE2Q9NRR3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 AC138932.3-201ENST00000567634 1902 ntBASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42SE2Q9NRR3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42SE2Q9NRR3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms