Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
MRM3Q9HC36 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
MRM3Q9HC36 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.46■■□□□ 1.51
MRM3Q9HC36 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
MRM3Q9HC36 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MRM3Q9HC36 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.45■■□□□ 1.5
MRM3Q9HC36 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
MRM3Q9HC36 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
MRM3Q9HC36 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
MRM3Q9HC36 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRM3Q9HC36 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.44■■□□□ 1.5
MRM3Q9HC36 MIR4449-201ENST00000578365 66 ntBASIC24.44■■□□□ 1.5
MRM3Q9HC36 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRM3Q9HC36 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
MRM3Q9HC36 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.43■■□□□ 1.5
MRM3Q9HC36 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MRM3Q9HC36 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MRM3Q9HC36 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
MRM3Q9HC36 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
MRM3Q9HC36 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
MRM3Q9HC36 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 ERN1-208ENST00000606895 2068 ntBASIC24.42■■□□□ 1.5
MRM3Q9HC36 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRM3Q9HC36 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRM3Q9HC36 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRM3Q9HC36 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.41■■□□□ 1.5
MRM3Q9HC36 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
MRM3Q9HC36 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MRM3Q9HC36 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MRM3Q9HC36 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRM3Q9HC36 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
MRM3Q9HC36 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRM3Q9HC36 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MRM3Q9HC36 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRM3Q9HC36 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.4■■□□□ 1.5
MRM3Q9HC36 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.4■■□□□ 1.5
MRM3Q9HC36 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MRM3Q9HC36 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.39■■□□□ 1.49
MRM3Q9HC36 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.39■■□□□ 1.49
MRM3Q9HC36 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MRM3Q9HC36 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MRM3Q9HC36 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
MRM3Q9HC36 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
MRM3Q9HC36 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MRM3Q9HC36 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.38■■□□□ 1.49
MRM3Q9HC36 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MRM3Q9HC36 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MRM3Q9HC36 AL157400.5-201ENST00000507624 621 ntBASIC24.37■■□□□ 1.49
MRM3Q9HC36 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.37■■□□□ 1.49
MRM3Q9HC36 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
MRM3Q9HC36 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.37■■□□□ 1.49
MRM3Q9HC36 AC060814.1-201ENST00000554326 538 ntBASIC24.36■■□□□ 1.49
MRM3Q9HC36 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MRM3Q9HC36 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.36■■□□□ 1.49
MRM3Q9HC36 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
MRM3Q9HC36 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MRM3Q9HC36 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
MRM3Q9HC36 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
MRM3Q9HC36 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.35■■□□□ 1.49
MRM3Q9HC36 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MRM3Q9HC36 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MRM3Q9HC36 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MRM3Q9HC36 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
MRM3Q9HC36 AC020928.2-201ENST00000588717 2197 ntBASIC24.34■■□□□ 1.49
MRM3Q9HC36 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MRM3Q9HC36 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MRM3Q9HC36 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.33■■□□□ 1.49
MRM3Q9HC36 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MRM3Q9HC36 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MRM3Q9HC36 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MRM3Q9HC36 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
MRM3Q9HC36 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
MRM3Q9HC36 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
MRM3Q9HC36 AC025884.2-201ENST00000553429 711 ntBASIC24.32■■□□□ 1.48
MRM3Q9HC36 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.32■■□□□ 1.48
MRM3Q9HC36 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
MRM3Q9HC36 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
MRM3Q9HC36 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
MRM3Q9HC36 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MRM3Q9HC36 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
MRM3Q9HC36 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
MRM3Q9HC36 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.31■■□□□ 1.48
MRM3Q9HC36 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.3■■□□□ 1.48
MRM3Q9HC36 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms