Protein–RNA interactions for Protein: Q9H0X6

RNF208, RING finger protein 208, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF208Q9H0X6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RNF208Q9H0X6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
RNF208Q9H0X6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RNF208Q9H0X6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF208Q9H0X6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF208Q9H0X6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
RNF208Q9H0X6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF208Q9H0X6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.7■■■□□ 2.03
RNF208Q9H0X6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RNF208Q9H0X6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RNF208Q9H0X6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC27.69■■■□□ 2.02
RNF208Q9H0X6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RNF208Q9H0X6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.69■■■□□ 2.02
RNF208Q9H0X6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
RNF208Q9H0X6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
RNF208Q9H0X6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.68■■■□□ 2.02
RNF208Q9H0X6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.68■■■□□ 2.02
RNF208Q9H0X6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
RNF208Q9H0X6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.68■■■□□ 2.02
RNF208Q9H0X6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF208Q9H0X6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.66■■■□□ 2.02
RNF208Q9H0X6 TSPY9P-201ENST00000440215 945 ntBASIC27.66■■■□□ 2.02
RNF208Q9H0X6 TSPY11P-201ENST00000442607 1045 ntBASIC27.66■■■□□ 2.02
RNF208Q9H0X6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RNF208Q9H0X6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.66■■■□□ 2.02
RNF208Q9H0X6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
RNF208Q9H0X6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF208Q9H0X6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RNF208Q9H0X6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RNF208Q9H0X6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
RNF208Q9H0X6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RNF208Q9H0X6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.63■■■□□ 2.01
RNF208Q9H0X6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RNF208Q9H0X6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.62■■■□□ 2.01
RNF208Q9H0X6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RNF208Q9H0X6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RNF208Q9H0X6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
RNF208Q9H0X6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.62■■■□□ 2.01
RNF208Q9H0X6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RNF208Q9H0X6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.61■■■□□ 2.01
RNF208Q9H0X6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.61■■■□□ 2.01
RNF208Q9H0X6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.61■■■□□ 2.01
RNF208Q9H0X6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
RNF208Q9H0X6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RNF208Q9H0X6 AC131281.2-201ENST00000520478 145 ntBASIC27.6■■■□□ 2.01
RNF208Q9H0X6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.6■■■□□ 2.01
RNF208Q9H0X6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
RNF208Q9H0X6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF208Q9H0X6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RNF208Q9H0X6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF208Q9H0X6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
RNF208Q9H0X6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
RNF208Q9H0X6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RNF208Q9H0X6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
RNF208Q9H0X6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.58■■■□□ 2.01
RNF208Q9H0X6 AC022616.5-201ENST00000518796 181 ntBASIC27.58■■■□□ 2.01
RNF208Q9H0X6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
RNF208Q9H0X6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RNF208Q9H0X6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2
RNF208Q9H0X6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.57■■■□□ 2
RNF208Q9H0X6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.57■■■□□ 2
RNF208Q9H0X6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF208Q9H0X6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF208Q9H0X6 AL136116.3-201ENST00000402907 1138 ntBASIC27.57■■■□□ 2
RNF208Q9H0X6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.57■■■□□ 2
RNF208Q9H0X6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.57■■■□□ 2
RNF208Q9H0X6 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.57■■■□□ 2
RNF208Q9H0X6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.57■■■□□ 2
RNF208Q9H0X6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RNF208Q9H0X6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.57■■■□□ 2
RNF208Q9H0X6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.56■■■□□ 2
RNF208Q9H0X6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.56■■■□□ 2
RNF208Q9H0X6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.55■■■□□ 2
RNF208Q9H0X6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.55■■■□□ 2
RNF208Q9H0X6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.55■■■□□ 2
RNF208Q9H0X6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
RNF208Q9H0X6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RNF208Q9H0X6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
RNF208Q9H0X6 ST7-AS1-201ENST00000456775 1889 ntBASIC27.54■■■□□ 2
RNF208Q9H0X6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.54■■■□□ 2
RNF208Q9H0X6 AC005837.3-201ENST00000612163 286 ntBASIC27.54■■■□□ 2
RNF208Q9H0X6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.54■■■□□ 2
RNF208Q9H0X6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
RNF208Q9H0X6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.53■■■□□ 2
RNF208Q9H0X6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.53■■■□□ 2
RNF208Q9H0X6 KRT18P24-201ENST00000344739 1156 ntBASIC27.53■■■□□ 2
RNF208Q9H0X6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.53■■■□□ 2
RNF208Q9H0X6 AC137630.3-201ENST00000607245 391 ntBASIC27.53■■■□□ 2
RNF208Q9H0X6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.53■■■□□ 2
RNF208Q9H0X6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RNF208Q9H0X6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RNF208Q9H0X6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.52■■■□□ 2
RNF208Q9H0X6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms