Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMD2Q9BT23 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMD2Q9BT23 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LIMD2Q9BT23 WHAMMP3-201ENST00000611636 1609 ntBASIC14.3□□□□□ -0.12
LIMD2Q9BT23 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LIMD2Q9BT23 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LIMD2Q9BT23 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIMD2Q9BT23 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIMD2Q9BT23 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LIMD2Q9BT23 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIMD2Q9BT23 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 ABHD17AP4-201ENST00000411545 909 ntBASIC14.27□□□□□ -0.13
LIMD2Q9BT23 AC126177.7-201ENST00000547904 679 ntBASIC14.27□□□□□ -0.13
LIMD2Q9BT23 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 AC148477.6-201ENST00000623746 465 ntBASIC14.27□□□□□ -0.13
LIMD2Q9BT23 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LIMD2Q9BT23 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIMD2Q9BT23 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LIMD2Q9BT23 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LIMD2Q9BT23 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 AP004609.3-201ENST00000610705 1884 ntBASIC14.23□□□□□ -0.13
LIMD2Q9BT23 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 AL449106.1-201ENST00000608517 1980 ntBASIC14.23□□□□□ -0.13
LIMD2Q9BT23 AC142472.1-201ENST00000612013 1741 ntBASIC14.23□□□□□ -0.13
LIMD2Q9BT23 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
LIMD2Q9BT23 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 MIR219A2-201ENST00000608502 1504 ntBASIC14.22□□□□□ -0.13
LIMD2Q9BT23 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC14.22□□□□□ -0.13
LIMD2Q9BT23 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms