Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.25■□□□□ 0.83
PCGF1Q9BSM1 AC012354.3-201ENST00000623734 483 ntBASIC20.25■□□□□ 0.83
PCGF1Q9BSM1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.25■□□□□ 0.83
PCGF1Q9BSM1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.25■□□□□ 0.83
PCGF1Q9BSM1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCGF1Q9BSM1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCGF1Q9BSM1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCGF1Q9BSM1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCGF1Q9BSM1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.23■□□□□ 0.83
PCGF1Q9BSM1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCGF1Q9BSM1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.23■□□□□ 0.83
PCGF1Q9BSM1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCGF1Q9BSM1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCGF1Q9BSM1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCGF1Q9BSM1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 AC025884.2-201ENST00000553429 711 ntBASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 AC133552.2-201ENST00000619106 1032 ntBASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.21■□□□□ 0.83
PCGF1Q9BSM1 AL359504.2-201ENST00000605506 1601 ntBASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.2■□□□□ 0.82
PCGF1Q9BSM1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 KRT18P60-201ENST00000312876 1297 ntBASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 RP9P-202ENST00000450133 1212 ntBASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCGF1Q9BSM1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 MIR3960-201ENST00000583311 91 ntBASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCGF1Q9BSM1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 AC093536.1-201ENST00000569153 554 ntBASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 AC009831.1-201ENST00000580420 1582 ntBASIC20.17■□□□□ 0.82
PCGF1Q9BSM1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 AL033527.3-201ENST00000566366 1196 ntBASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PCGF1Q9BSM1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCGF1Q9BSM1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 AL449106.1-201ENST00000608517 1980 ntBASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 AL592293.1-201ENST00000502889 1188 ntBASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 AC026202.3-201ENST00000600805 1127 ntBASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCGF1Q9BSM1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms