Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
RFFLQ8WZ73 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFFLQ8WZ73 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFFLQ8WZ73 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RFFLQ8WZ73 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 HSD17B1P1-201ENST00000590052 955 ntBASIC25.83■■□□□ 1.73
RFFLQ8WZ73 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 CR559946.2-201ENST00000623684 991 ntBASIC25.83■■□□□ 1.73
RFFLQ8WZ73 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.83■■□□□ 1.73
RFFLQ8WZ73 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RFFLQ8WZ73 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFFLQ8WZ73 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFFLQ8WZ73 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RFFLQ8WZ73 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.81■■□□□ 1.72
RFFLQ8WZ73 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.81■■□□□ 1.72
RFFLQ8WZ73 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
RFFLQ8WZ73 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
RFFLQ8WZ73 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.8■■□□□ 1.72
RFFLQ8WZ73 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.8■■□□□ 1.72
RFFLQ8WZ73 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RFFLQ8WZ73 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.78■■□□□ 1.72
RFFLQ8WZ73 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
RFFLQ8WZ73 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
RFFLQ8WZ73 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFFLQ8WZ73 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.77■■□□□ 1.72
RFFLQ8WZ73 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RFFLQ8WZ73 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RFFLQ8WZ73 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RFFLQ8WZ73 AL359258.2-201ENST00000564063 1566 ntBASIC25.75■■□□□ 1.71
RFFLQ8WZ73 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RFFLQ8WZ73 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.75■■□□□ 1.71
RFFLQ8WZ73 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RFFLQ8WZ73 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
RFFLQ8WZ73 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.74■■□□□ 1.71
RFFLQ8WZ73 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RFFLQ8WZ73 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.72■■□□□ 1.71
RFFLQ8WZ73 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RFFLQ8WZ73 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFFLQ8WZ73 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFFLQ8WZ73 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
RFFLQ8WZ73 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.71■■□□□ 1.71
RFFLQ8WZ73 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.71■■□□□ 1.71
RFFLQ8WZ73 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RFFLQ8WZ73 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
RFFLQ8WZ73 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.7■■□□□ 1.7
RFFLQ8WZ73 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RFFLQ8WZ73 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RFFLQ8WZ73 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 AL359504.2-201ENST00000605506 1601 ntBASIC25.69■■□□□ 1.7
RFFLQ8WZ73 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.69■■□□□ 1.7
RFFLQ8WZ73 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RFFLQ8WZ73 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms