Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CTCFLQ8NI51 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CTCFLQ8NI51 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
CTCFLQ8NI51 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.45■■■□□ 2.14
CTCFLQ8NI51 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
CTCFLQ8NI51 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.44■■■□□ 2.14
CTCFLQ8NI51 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.44■■■□□ 2.14
CTCFLQ8NI51 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.44■■■□□ 2.14
CTCFLQ8NI51 AC093536.1-201ENST00000569153 554 ntBASIC28.44■■■□□ 2.14
CTCFLQ8NI51 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CTCFLQ8NI51 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
CTCFLQ8NI51 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.43■■■□□ 2.14
CTCFLQ8NI51 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CTCFLQ8NI51 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.41■■■□□ 2.14
CTCFLQ8NI51 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
CTCFLQ8NI51 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CTCFLQ8NI51 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.4■■■□□ 2.14
CTCFLQ8NI51 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
CTCFLQ8NI51 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
CTCFLQ8NI51 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CTCFLQ8NI51 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CTCFLQ8NI51 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CTCFLQ8NI51 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.38■■■□□ 2.13
CTCFLQ8NI51 AC026202.3-201ENST00000600805 1127 ntBASIC28.38■■■□□ 2.13
CTCFLQ8NI51 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CTCFLQ8NI51 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CTCFLQ8NI51 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CTCFLQ8NI51 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CTCFLQ8NI51 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.37■■■□□ 2.13
CTCFLQ8NI51 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CTCFLQ8NI51 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CTCFLQ8NI51 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CTCFLQ8NI51 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CTCFLQ8NI51 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
CTCFLQ8NI51 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
CTCFLQ8NI51 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 AC133552.2-201ENST00000619106 1032 ntBASIC28.35■■■□□ 2.13
CTCFLQ8NI51 AC009831.1-201ENST00000580420 1582 ntBASIC28.35■■■□□ 2.13
CTCFLQ8NI51 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CTCFLQ8NI51 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.34■■■□□ 2.13
CTCFLQ8NI51 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CTCFLQ8NI51 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.34■■■□□ 2.13
CTCFLQ8NI51 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.34■■■□□ 2.13
CTCFLQ8NI51 U85056.1-201ENST00000616429 682 ntBASIC28.34■■■□□ 2.13
CTCFLQ8NI51 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CTCFLQ8NI51 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CTCFLQ8NI51 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CTCFLQ8NI51 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CTCFLQ8NI51 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.33■■■□□ 2.13
CTCFLQ8NI51 RAP2CP1-202ENST00000605179 643 ntBASIC28.33■■■□□ 2.13
CTCFLQ8NI51 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CTCFLQ8NI51 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CTCFLQ8NI51 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CTCFLQ8NI51 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CTCFLQ8NI51 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CTCFLQ8NI51 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.31■■■□□ 2.12
CTCFLQ8NI51 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CTCFLQ8NI51 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
CTCFLQ8NI51 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CTCFLQ8NI51 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.3■■■□□ 2.12
CTCFLQ8NI51 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.3■■■□□ 2.12
CTCFLQ8NI51 NTF6A-201ENST00000591175 560 ntBASIC28.3■■■□□ 2.12
CTCFLQ8NI51 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CTCFLQ8NI51 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.29■■■□□ 2.12
CTCFLQ8NI51 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CTCFLQ8NI51 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CTCFLQ8NI51 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
CTCFLQ8NI51 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CTCFLQ8NI51 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CTCFLQ8NI51 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CTCFLQ8NI51 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.26■■■□□ 2.11
CTCFLQ8NI51 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CTCFLQ8NI51 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CTCFLQ8NI51 AL592293.1-201ENST00000502889 1188 ntBASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms