Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CSNK2A3Q8NEV1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.08■□□□□ 0.97
CSNK2A3Q8NEV1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK2A3Q8NEV1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK2A3Q8NEV1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK2A3Q8NEV1 AC145676.1-201ENST00000514988 2004 ntBASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 MIR639-201ENST00000384974 98 ntBASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK2A3Q8NEV1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
CSNK2A3Q8NEV1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK2A3Q8NEV1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CSNK2A3Q8NEV1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK2A3Q8NEV1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CSNK2A3Q8NEV1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CSNK2A3Q8NEV1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 AC092803.2-201ENST00000564287 1899 ntBASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK2A3Q8NEV1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK2A3Q8NEV1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK2A3Q8NEV1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK2A3Q8NEV1 AC020928.2-201ENST00000588717 2197 ntBASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 AL359504.2-201ENST00000605506 1601 ntBASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK2A3Q8NEV1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CSNK2A3Q8NEV1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK2A3Q8NEV1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK2A3Q8NEV1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK2A3Q8NEV1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms