Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC38.85■■■■□ 3.81
CFAP43Q8NDM7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC38.85■■■■□ 3.81
CFAP43Q8NDM7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC38.84■■■■□ 3.81
CFAP43Q8NDM7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC38.83■■■■□ 3.81
CFAP43Q8NDM7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC38.82■■■■□ 3.81
CFAP43Q8NDM7 WHAMMP3-201ENST00000611636 1609 ntBASIC38.82■■■■□ 3.81
CFAP43Q8NDM7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 AL031848.2-201ENST00000607670 837 ntBASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 MIR3960-201ENST00000583311 91 ntBASIC38.81■■■■□ 3.8
CFAP43Q8NDM7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC38.79■■■■□ 3.8
CFAP43Q8NDM7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
CFAP43Q8NDM7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
CFAP43Q8NDM7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
CFAP43Q8NDM7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC38.78■■■■□ 3.8
CFAP43Q8NDM7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC38.77■■■■□ 3.8
CFAP43Q8NDM7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC38.76■■■■□ 3.8
CFAP43Q8NDM7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC38.76■■■■□ 3.79
CFAP43Q8NDM7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC38.75■■■■□ 3.79
CFAP43Q8NDM7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC38.74■■■■□ 3.79
CFAP43Q8NDM7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC38.74■■■■□ 3.79
CFAP43Q8NDM7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC38.74■■■■□ 3.79
CFAP43Q8NDM7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
CFAP43Q8NDM7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC38.74■■■■□ 3.79
CFAP43Q8NDM7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
CFAP43Q8NDM7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CFAP43Q8NDM7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
CFAP43Q8NDM7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
CFAP43Q8NDM7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
CFAP43Q8NDM7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CFAP43Q8NDM7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CFAP43Q8NDM7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC38.72■■■■□ 3.79
CFAP43Q8NDM7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC38.72■■■■□ 3.79
CFAP43Q8NDM7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC38.71■■■■□ 3.79
CFAP43Q8NDM7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
CFAP43Q8NDM7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CFAP43Q8NDM7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
CFAP43Q8NDM7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
CFAP43Q8NDM7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CFAP43Q8NDM7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
CFAP43Q8NDM7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC38.69■■■■□ 3.78
CFAP43Q8NDM7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC38.67■■■■□ 3.78
CFAP43Q8NDM7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
CFAP43Q8NDM7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC38.67■■■■□ 3.78
CFAP43Q8NDM7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC38.67■■■■□ 3.78
CFAP43Q8NDM7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
CFAP43Q8NDM7 Z92544.1-202ENST00000571933 1220 ntBASIC38.66■■■■□ 3.78
CFAP43Q8NDM7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC38.65■■■■□ 3.78
CFAP43Q8NDM7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC38.65■■■■□ 3.78
CFAP43Q8NDM7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 LINC01003-201ENST00000564834 1764 ntBASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
CFAP43Q8NDM7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC38.63■■■■□ 3.77
CFAP43Q8NDM7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC38.63■■■■□ 3.77
CFAP43Q8NDM7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC38.63■■■■□ 3.77
CFAP43Q8NDM7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 GRAMD4P7-201ENST00000578182 1232 ntBASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 AC139426.1-201ENST00000568218 2529 ntBASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC38.62■■■■□ 3.77
CFAP43Q8NDM7 AL359504.2-201ENST00000605506 1601 ntBASIC38.61■■■■□ 3.77
CFAP43Q8NDM7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC38.6■■■■□ 3.77
CFAP43Q8NDM7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC38.6■■■■□ 3.77
CFAP43Q8NDM7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
CFAP43Q8NDM7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC38.59■■■■□ 3.77
CFAP43Q8NDM7 AC008406.3-201ENST00000620001 1374 ntBASIC38.59■■■■□ 3.77
CFAP43Q8NDM7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
CFAP43Q8NDM7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 MIR638-201ENST00000385237 100 ntBASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC38.58■■■■□ 3.77
CFAP43Q8NDM7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC38.57■■■■□ 3.77
CFAP43Q8NDM7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC38.56■■■■□ 3.76
CFAP43Q8NDM7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC38.56■■■■□ 3.76
CFAP43Q8NDM7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC38.56■■■■□ 3.76
CFAP43Q8NDM7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC38.56■■■■□ 3.76
CFAP43Q8NDM7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC38.56■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms