Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.18■□□□□ 0.66
C3orf56Q8N813 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C3orf56Q8N813 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.17■□□□□ 0.66
C3orf56Q8N813 UNC93B8-201ENST00000511903 705 ntBASIC19.17■□□□□ 0.66
C3orf56Q8N813 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.17■□□□□ 0.66
C3orf56Q8N813 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.17■□□□□ 0.66
C3orf56Q8N813 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C3orf56Q8N813 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C3orf56Q8N813 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C3orf56Q8N813 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
C3orf56Q8N813 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C3orf56Q8N813 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C3orf56Q8N813 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C3orf56Q8N813 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.16■□□□□ 0.66
C3orf56Q8N813 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.15■□□□□ 0.66
C3orf56Q8N813 TSPY9P-201ENST00000440215 945 ntBASIC19.15■□□□□ 0.66
C3orf56Q8N813 TSPY11P-201ENST00000442607 1045 ntBASIC19.15■□□□□ 0.66
C3orf56Q8N813 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C3orf56Q8N813 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C3orf56Q8N813 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C3orf56Q8N813 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C3orf56Q8N813 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C3orf56Q8N813 RPS2P7-201ENST00000447334 885 ntBASIC19.14■□□□□ 0.65
C3orf56Q8N813 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
C3orf56Q8N813 AL359504.2-201ENST00000605506 1601 ntBASIC19.14■□□□□ 0.65
C3orf56Q8N813 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
C3orf56Q8N813 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.13■□□□□ 0.65
C3orf56Q8N813 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C3orf56Q8N813 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
C3orf56Q8N813 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.12■□□□□ 0.65
C3orf56Q8N813 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C3orf56Q8N813 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.12■□□□□ 0.65
C3orf56Q8N813 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.12■□□□□ 0.65
C3orf56Q8N813 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.12■□□□□ 0.65
C3orf56Q8N813 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
C3orf56Q8N813 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.11■□□□□ 0.65
C3orf56Q8N813 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.11■□□□□ 0.65
C3orf56Q8N813 AC022616.5-201ENST00000518796 181 ntBASIC19.11■□□□□ 0.65
C3orf56Q8N813 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
C3orf56Q8N813 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C3orf56Q8N813 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.1■□□□□ 0.65
C3orf56Q8N813 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
C3orf56Q8N813 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
C3orf56Q8N813 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
C3orf56Q8N813 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.1■□□□□ 0.65
C3orf56Q8N813 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.1■□□□□ 0.65
C3orf56Q8N813 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
C3orf56Q8N813 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C3orf56Q8N813 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
C3orf56Q8N813 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
C3orf56Q8N813 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
C3orf56Q8N813 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.09■□□□□ 0.65
C3orf56Q8N813 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C3orf56Q8N813 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
C3orf56Q8N813 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
C3orf56Q8N813 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
C3orf56Q8N813 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C3orf56Q8N813 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.08■□□□□ 0.64
C3orf56Q8N813 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
C3orf56Q8N813 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
C3orf56Q8N813 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.07■□□□□ 0.64
C3orf56Q8N813 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C3orf56Q8N813 AL136116.3-201ENST00000402907 1138 ntBASIC19.07■□□□□ 0.64
C3orf56Q8N813 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.07■□□□□ 0.64
C3orf56Q8N813 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.07■□□□□ 0.64
C3orf56Q8N813 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
C3orf56Q8N813 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
C3orf56Q8N813 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C3orf56Q8N813 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
C3orf56Q8N813 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
C3orf56Q8N813 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C3orf56Q8N813 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
C3orf56Q8N813 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C3orf56Q8N813 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
C3orf56Q8N813 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
C3orf56Q8N813 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C3orf56Q8N813 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.04■□□□□ 0.64
C3orf56Q8N813 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.04■□□□□ 0.64
C3orf56Q8N813 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.04■□□□□ 0.64
C3orf56Q8N813 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.04■□□□□ 0.64
C3orf56Q8N813 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
C3orf56Q8N813 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C3orf56Q8N813 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 1662.4 ms