Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 MIR6765-201ENST00000614092 87 ntBASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TTC9BQ8N6N2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TTC9BQ8N6N2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.82■■□□□ 1.72
TTC9BQ8N6N2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
TTC9BQ8N6N2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
TTC9BQ8N6N2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TTC9BQ8N6N2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TTC9BQ8N6N2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 AC010980.1-201ENST00000587192 1142 ntBASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TTC9BQ8N6N2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC9BQ8N6N2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
TTC9BQ8N6N2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC9BQ8N6N2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TTC9BQ8N6N2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
TTC9BQ8N6N2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TTC9BQ8N6N2 AC018755.3-202ENST00000596210 929 ntBASIC25.77■■□□□ 1.72
TTC9BQ8N6N2 BHLHE23-202ENST00000612929 1109 ntBASIC25.77■■□□□ 1.72
TTC9BQ8N6N2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TTC9BQ8N6N2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TTC9BQ8N6N2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
TTC9BQ8N6N2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TTC9BQ8N6N2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TTC9BQ8N6N2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TTC9BQ8N6N2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.75■■□□□ 1.71
TTC9BQ8N6N2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 PVT1_1.1-201ENST00000615125 194 ntBASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.74■■□□□ 1.71
TTC9BQ8N6N2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
TTC9BQ8N6N2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TTC9BQ8N6N2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.72■■□□□ 1.71
TTC9BQ8N6N2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC9BQ8N6N2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC9BQ8N6N2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TTC9BQ8N6N2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 AC139795.1-202ENST00000500444 432 ntBASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 AC142472.1-201ENST00000612013 1741 ntBASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 KRT8P33-201ENST00000508125 1423 ntBASIC25.71■■□□□ 1.71
TTC9BQ8N6N2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TTC9BQ8N6N2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC9BQ8N6N2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TTC9BQ8N6N2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.7■■□□□ 1.7
TTC9BQ8N6N2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.7■■□□□ 1.7
TTC9BQ8N6N2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 AP004609.3-201ENST00000610705 1884 ntBASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TTC9BQ8N6N2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
TTC9BQ8N6N2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC9BQ8N6N2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC9BQ8N6N2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.67■■□□□ 1.7
TTC9BQ8N6N2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TTC9BQ8N6N2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.66■■□□□ 1.7
TTC9BQ8N6N2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 AC103834.1-201ENST00000520383 144 ntBASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.65■■□□□ 1.7
TTC9BQ8N6N2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TTC9BQ8N6N2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms