Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HIST3H2BBQ8N257 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIST3H2BBQ8N257 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIST3H2BBQ8N257 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST3H2BBQ8N257 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST3H2BBQ8N257 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST3H2BBQ8N257 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST3H2BBQ8N257 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST3H2BBQ8N257 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST3H2BBQ8N257 AL117328.2-201ENST00000624617 1940 ntBASIC18.38■□□□□ 0.53
HIST3H2BBQ8N257 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST3H2BBQ8N257 LINC00565-201ENST00000562710 2331 ntBASIC18.38■□□□□ 0.53
HIST3H2BBQ8N257 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HIST3H2BBQ8N257 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 C9orf163-202ENST00000624034 2573 ntBASIC18.37■□□□□ 0.53
HIST3H2BBQ8N257 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 AC022211.4-201ENST00000625094 2161 ntBASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST3H2BBQ8N257 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST3H2BBQ8N257 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 AL121603.2-201ENST00000557373 2117 ntBASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HIST3H2BBQ8N257 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.33■□□□□ 0.53
HIST3H2BBQ8N257 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIST3H2BBQ8N257 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.33■□□□□ 0.52
HIST3H2BBQ8N257 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.33■□□□□ 0.52
HIST3H2BBQ8N257 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 C1orf229-201ENST00000623686 2258 ntBASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST3H2BBQ8N257 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST3H2BBQ8N257 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST3H2BBQ8N257 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HIST3H2BBQ8N257 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 ABCB10P4-201ENST00000566803 2184 ntBASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 WHAMMP3-201ENST00000611636 1609 ntBASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST3H2BBQ8N257 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2BBQ8N257 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2BBQ8N257 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2BBQ8N257 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST3H2BBQ8N257 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms