Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.46■■□□□ 1.35
COL27A1Q8IZC6 ABCB10P1-201ENST00000614297 2181 ntBASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 AC087393.1-201ENST00000582896 145 ntBASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 THA1P-201ENST00000590384 1145 ntBASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 AC019171.1-201ENST00000601251 1056 ntBASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 AL031848.2-201ENST00000607670 837 ntBASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 AC018755.3-202ENST00000596210 929 ntBASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL27A1Q8IZC6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 RPS2P7-201ENST00000447334 885 ntBASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 AL356441.2-201ENST00000443009 864 ntBASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 Z92544.1-202ENST00000571933 1220 ntBASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.33■■□□□ 1.32
COL27A1Q8IZC6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 AL449106.1-201ENST00000608517 1980 ntBASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 DRD5P2-201ENST00000421395 2012 ntBASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms