Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HDDC2Q7Z4H3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HDDC2Q7Z4H3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.94■■□□□ 1.1
HDDC2Q7Z4H3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HDDC2Q7Z4H3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HDDC2Q7Z4H3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HDDC2Q7Z4H3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HDDC2Q7Z4H3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 AL359258.2-201ENST00000564063 1566 ntBASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HDDC2Q7Z4H3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.9■■□□□ 1.1
HDDC2Q7Z4H3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.9■■□□□ 1.1
HDDC2Q7Z4H3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HDDC2Q7Z4H3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HDDC2Q7Z4H3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.9■■□□□ 1.1
HDDC2Q7Z4H3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HDDC2Q7Z4H3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HDDC2Q7Z4H3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HDDC2Q7Z4H3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HDDC2Q7Z4H3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HDDC2Q7Z4H3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HDDC2Q7Z4H3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HDDC2Q7Z4H3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HDDC2Q7Z4H3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 MIR639-201ENST00000384974 98 ntBASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HDDC2Q7Z4H3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
HDDC2Q7Z4H3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HDDC2Q7Z4H3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HDDC2Q7Z4H3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HDDC2Q7Z4H3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDDC2Q7Z4H3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
HDDC2Q7Z4H3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.82■■□□□ 1.08
HDDC2Q7Z4H3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.82■■□□□ 1.08
HDDC2Q7Z4H3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HDDC2Q7Z4H3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
HDDC2Q7Z4H3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDDC2Q7Z4H3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDDC2Q7Z4H3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDDC2Q7Z4H3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDDC2Q7Z4H3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDDC2Q7Z4H3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms