Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RNF213Q63HN8 AC022517.1-201ENST00000592429 346 ntBASIC13.47□□□□□ -0.25
RNF213Q63HN8 IKBKGP1-201ENST00000612193 1073 ntBASIC13.47□□□□□ -0.25
RNF213Q63HN8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RNF213Q63HN8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF213Q63HN8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RNF213Q63HN8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.46□□□□□ -0.25
RNF213Q63HN8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.46□□□□□ -0.26
RNF213Q63HN8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
RNF213Q63HN8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.46□□□□□ -0.26
RNF213Q63HN8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC13.46□□□□□ -0.26
RNF213Q63HN8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF213Q63HN8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF213Q63HN8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF213Q63HN8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF213Q63HN8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF213Q63HN8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF213Q63HN8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF213Q63HN8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF213Q63HN8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC13.44□□□□□ -0.26
RNF213Q63HN8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RNF213Q63HN8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF213Q63HN8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF213Q63HN8 AL161658.1-201ENST00000623641 1967 ntBASIC13.43□□□□□ -0.26
RNF213Q63HN8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF213Q63HN8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 AL355001.2-201ENST00000620617 1191 ntBASIC13.43□□□□□ -0.26
RNF213Q63HN8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 BX664725.1-201ENST00000438252 379 ntBASIC13.43□□□□□ -0.26
RNF213Q63HN8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 UNC93B3-201ENST00000308076 687 ntBASIC13.43□□□□□ -0.26
RNF213Q63HN8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF213Q63HN8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC13.43□□□□□ -0.26
RNF213Q63HN8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF213Q63HN8 ABHD17AP1-201ENST00000358206 933 ntBASIC13.42□□□□□ -0.26
RNF213Q63HN8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF213Q63HN8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF213Q63HN8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF213Q63HN8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF213Q63HN8 MIR3621-201ENST00000580529 85 ntBASIC13.42□□□□□ -0.26
RNF213Q63HN8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.42□□□□□ -0.26
RNF213Q63HN8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF213Q63HN8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF213Q63HN8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF213Q63HN8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF213Q63HN8 HLA-L-209ENST00000420110 1011 ntBASIC13.41□□□□□ -0.26
RNF213Q63HN8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNF213Q63HN8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
RNF213Q63HN8 PBX2P1-201ENST00000493219 1291 ntBASIC13.41□□□□□ -0.26
RNF213Q63HN8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF213Q63HN8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.4□□□□□ -0.26
RNF213Q63HN8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.4□□□□□ -0.26
RNF213Q63HN8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.4□□□□□ -0.26
RNF213Q63HN8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 AL512631.2-201ENST00000604634 923 ntBASIC13.4□□□□□ -0.26
RNF213Q63HN8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RNF213Q63HN8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF213Q63HN8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RNF213Q63HN8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.39□□□□□ -0.27
RNF213Q63HN8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.39□□□□□ -0.27
RNF213Q63HN8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF213Q63HN8 AC066615.1-201ENST00000640911 628 ntBASIC13.39□□□□□ -0.27
RNF213Q63HN8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF213Q63HN8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC13.39□□□□□ -0.27
RNF213Q63HN8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RNF213Q63HN8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RNF213Q63HN8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC13.38□□□□□ -0.27
RNF213Q63HN8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RNF213Q63HN8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.38□□□□□ -0.27
RNF213Q63HN8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF213Q63HN8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RNF213Q63HN8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RNF213Q63HN8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
RNF213Q63HN8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF213Q63HN8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF213Q63HN8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF213Q63HN8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF213Q63HN8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC13.37□□□□□ -0.27
RNF213Q63HN8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RNF213Q63HN8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RNF213Q63HN8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RNF213Q63HN8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RNF213Q63HN8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms