Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATPAF1Q5TC12 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATPAF1Q5TC12 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATPAF1Q5TC12 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.96■□□□□ 0.95
ATPAF1Q5TC12 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATPAF1Q5TC12 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
ATPAF1Q5TC12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATPAF1Q5TC12 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATPAF1Q5TC12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 MIR219A2-201ENST00000608502 1504 ntBASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.93■□□□□ 0.94
ATPAF1Q5TC12 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ATPAF1Q5TC12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATPAF1Q5TC12 MIR4449-201ENST00000578365 66 ntBASIC20.91■□□□□ 0.94
ATPAF1Q5TC12 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF1Q5TC12 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATPAF1Q5TC12 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF1Q5TC12 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF1Q5TC12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.89■□□□□ 0.93
ATPAF1Q5TC12 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF1Q5TC12 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATPAF1Q5TC12 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATPAF1Q5TC12 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATPAF1Q5TC12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATPAF1Q5TC12 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATPAF1Q5TC12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATPAF1Q5TC12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATPAF1Q5TC12 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATPAF1Q5TC12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.86■□□□□ 0.93
ATPAF1Q5TC12 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATPAF1Q5TC12 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATPAF1Q5TC12 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.86■□□□□ 0.93
ATPAF1Q5TC12 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.85■□□□□ 0.93
ATPAF1Q5TC12 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATPAF1Q5TC12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATPAF1Q5TC12 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATPAF1Q5TC12 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATPAF1Q5TC12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATPAF1Q5TC12 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ATPAF1Q5TC12 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATPAF1Q5TC12 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATPAF1Q5TC12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATPAF1Q5TC12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ATPAF1Q5TC12 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATPAF1Q5TC12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms