Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRRK2Q5S007 AL136116.3-201ENST00000402907 1138 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 MIR3621-201ENST00000580529 85 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRK2Q5S007 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.75■■□□□ 1.07
LRRK2Q5S007 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.74■■□□□ 1.07
LRRK2Q5S007 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.74■■□□□ 1.07
LRRK2Q5S007 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRK2Q5S007 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRK2Q5S007 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRRK2Q5S007 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.74■■□□□ 1.07
LRRK2Q5S007 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.74■■□□□ 1.07
LRRK2Q5S007 RPS2P7-201ENST00000447334 885 ntBASIC21.73■■□□□ 1.07
LRRK2Q5S007 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.73■■□□□ 1.07
LRRK2Q5S007 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.73■■□□□ 1.07
LRRK2Q5S007 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.73■■□□□ 1.07
LRRK2Q5S007 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.73■■□□□ 1.07
LRRK2Q5S007 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRRK2Q5S007 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LRRK2Q5S007 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRK2Q5S007 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRK2Q5S007 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRK2Q5S007 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRK2Q5S007 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRK2Q5S007 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRK2Q5S007 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRK2Q5S007 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRK2Q5S007 SUDS3P1-201ENST00000505831 966 ntBASIC21.7■■□□□ 1.06
LRRK2Q5S007 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRK2Q5S007 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
LRRK2Q5S007 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRK2Q5S007 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRK2Q5S007 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRK2Q5S007 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRK2Q5S007 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRK2Q5S007 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRK2Q5S007 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LRRK2Q5S007 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRK2Q5S007 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRK2Q5S007 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRRK2Q5S007 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRK2Q5S007 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRK2Q5S007 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRK2Q5S007 AC135279.3-201ENST00000610945 1311 ntBASIC21.68■■□□□ 1.06
LRRK2Q5S007 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.67■■□□□ 1.06
LRRK2Q5S007 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRK2Q5S007 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRK2Q5S007 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRK2Q5S007 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRK2Q5S007 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.67■■□□□ 1.06
LRRK2Q5S007 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRK2Q5S007 TSPY9P-201ENST00000440215 945 ntBASIC21.67■■□□□ 1.06
LRRK2Q5S007 TSPY11P-201ENST00000442607 1045 ntBASIC21.67■■□□□ 1.06
LRRK2Q5S007 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRK2Q5S007 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRK2Q5S007 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRK2Q5S007 AC092028.1-203ENST00000608262 953 ntBASIC21.66■■□□□ 1.06
LRRK2Q5S007 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRK2Q5S007 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRK2Q5S007 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRK2Q5S007 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRK2Q5S007 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRK2Q5S007 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.65■■□□□ 1.06
LRRK2Q5S007 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRK2Q5S007 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRK2Q5S007 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LRRK2Q5S007 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LRRK2Q5S007 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRK2Q5S007 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRRK2Q5S007 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LRRK2Q5S007 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRK2Q5S007 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.63■■□□□ 1.05
LRRK2Q5S007 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK2Q5S007 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK2Q5S007 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.63■■□□□ 1.05
LRRK2Q5S007 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.62■■□□□ 1.05
LRRK2Q5S007 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
LRRK2Q5S007 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK2Q5S007 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK2Q5S007 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.62■■□□□ 1.05
LRRK2Q5S007 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRK2Q5S007 AC021242.3-201ENST00000607598 1377 ntBASIC21.61■■□□□ 1.05
LRRK2Q5S007 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRK2Q5S007 KRT18P24-201ENST00000344739 1156 ntBASIC21.61■■□□□ 1.05
LRRK2Q5S007 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.61■■□□□ 1.05
LRRK2Q5S007 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.61■■□□□ 1.05
LRRK2Q5S007 AC137630.3-201ENST00000607245 391 ntBASIC21.61■■□□□ 1.05
LRRK2Q5S007 AL135925.1-201ENST00000605920 1701 ntBASIC21.6■■□□□ 1.05
LRRK2Q5S007 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK2Q5S007 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.6■■□□□ 1.05
LRRK2Q5S007 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK2Q5S007 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK2Q5S007 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK2Q5S007 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.6■■□□□ 1.05
LRRK2Q5S007 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRK2Q5S007 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRK2Q5S007 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRK2Q5S007 AL117332.1-201ENST00000622628 974 ntBASIC21.59■■□□□ 1.05
LRRK2Q5S007 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LRRK2Q5S007 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms