Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC01559Q495D7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01559Q495D7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LINC01559Q495D7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01559Q495D7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01559Q495D7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18■□□□□ 0.47
LINC01559Q495D7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01559Q495D7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01559Q495D7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01559Q495D7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01559Q495D7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01559Q495D7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01559Q495D7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.98■□□□□ 0.47
LINC01559Q495D7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01559Q495D7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01559Q495D7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01559Q495D7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01559Q495D7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01559Q495D7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01559Q495D7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LINC01559Q495D7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LINC01559Q495D7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.96■□□□□ 0.47
LINC01559Q495D7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01559Q495D7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.96■□□□□ 0.47
LINC01559Q495D7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01559Q495D7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01559Q495D7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01559Q495D7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01559Q495D7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01559Q495D7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 AP006261.1-201ENST00000584783 668 ntBASIC17.95■□□□□ 0.46
LINC01559Q495D7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01559Q495D7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01559Q495D7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01559Q495D7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01559Q495D7 AC022211.4-201ENST00000625094 2161 ntBASIC17.94■□□□□ 0.46
LINC01559Q495D7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01559Q495D7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01559Q495D7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01559Q495D7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LINC01559Q495D7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC01559Q495D7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC01559Q495D7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01559Q495D7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC01559Q495D7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01559Q495D7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.93■□□□□ 0.46
LINC01559Q495D7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01559Q495D7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.93■□□□□ 0.46
LINC01559Q495D7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01559Q495D7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC01559Q495D7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.92■□□□□ 0.46
LINC01559Q495D7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC01559Q495D7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.92■□□□□ 0.46
LINC01559Q495D7 AL139125.2-201ENST00000623134 1869 ntBASIC17.92■□□□□ 0.46
LINC01559Q495D7 AC138932.3-201ENST00000567634 1902 ntBASIC17.92■□□□□ 0.46
LINC01559Q495D7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC01559Q495D7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01559Q495D7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01559Q495D7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.91■□□□□ 0.46
LINC01559Q495D7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.91■□□□□ 0.46
LINC01559Q495D7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01559Q495D7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01559Q495D7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LINC01559Q495D7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC01559Q495D7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01559Q495D7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01559Q495D7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01559Q495D7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01559Q495D7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LINC01559Q495D7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LINC01559Q495D7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC01559Q495D7 AC087741.3-201ENST00000624270 1347 ntBASIC17.9■□□□□ 0.46
LINC01559Q495D7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC01559Q495D7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LINC01559Q495D7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
LINC01559Q495D7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01559Q495D7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC01559Q495D7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01559Q495D7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC01559Q495D7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC01559Q495D7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC01559Q495D7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC01559Q495D7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01559Q495D7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC01559Q495D7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms