Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.83■■■□□ 2.21
SHROOM1Q2M3G4 AL035685.1-201ENST00000636663 812 ntBASIC28.82■■■□□ 2.2
SHROOM1Q2M3G4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SHROOM1Q2M3G4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SHROOM1Q2M3G4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 AC018755.3-202ENST00000596210 929 ntBASIC28.81■■■□□ 2.2
SHROOM1Q2M3G4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SHROOM1Q2M3G4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHROOM1Q2M3G4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.79■■■□□ 2.2
SHROOM1Q2M3G4 AC139795.1-202ENST00000500444 432 ntBASIC28.79■■■□□ 2.2
SHROOM1Q2M3G4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHROOM1Q2M3G4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHROOM1Q2M3G4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SHROOM1Q2M3G4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.76■■■□□ 2.19
SHROOM1Q2M3G4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SHROOM1Q2M3G4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SHROOM1Q2M3G4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.75■■■□□ 2.19
SHROOM1Q2M3G4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.74■■■□□ 2.19
SHROOM1Q2M3G4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SHROOM1Q2M3G4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SHROOM1Q2M3G4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SHROOM1Q2M3G4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SHROOM1Q2M3G4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.71■■■□□ 2.19
SHROOM1Q2M3G4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
SHROOM1Q2M3G4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
SHROOM1Q2M3G4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SHROOM1Q2M3G4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SHROOM1Q2M3G4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SHROOM1Q2M3G4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.7■■■□□ 2.18
SHROOM1Q2M3G4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.18
SHROOM1Q2M3G4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 AC074183.2-201ENST00000623112 922 ntBASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHROOM1Q2M3G4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SHROOM1Q2M3G4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SHROOM1Q2M3G4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SHROOM1Q2M3G4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.67■■■□□ 2.18
SHROOM1Q2M3G4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.67■■■□□ 2.18
SHROOM1Q2M3G4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.67■■■□□ 2.18
SHROOM1Q2M3G4 AC009299.2-201ENST00000482477 511 ntBASIC28.67■■■□□ 2.18
SHROOM1Q2M3G4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.67■■■□□ 2.18
SHROOM1Q2M3G4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SHROOM1Q2M3G4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SHROOM1Q2M3G4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SHROOM1Q2M3G4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.65■■■□□ 2.18
SHROOM1Q2M3G4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SHROOM1Q2M3G4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.64■■■□□ 2.18
SHROOM1Q2M3G4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms