Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TBC1D28Q2M2D7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.17■□□□□ 0.98
TBC1D28Q2M2D7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TBC1D28Q2M2D7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TBC1D28Q2M2D7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.17■□□□□ 0.98
TBC1D28Q2M2D7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.17■□□□□ 0.98
TBC1D28Q2M2D7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 RP9P-202ENST00000450133 1212 ntBASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TBC1D28Q2M2D7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TBC1D28Q2M2D7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.14■□□□□ 0.98
TBC1D28Q2M2D7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D28Q2M2D7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D28Q2M2D7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
TBC1D28Q2M2D7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TBC1D28Q2M2D7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TBC1D28Q2M2D7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D28Q2M2D7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.13■□□□□ 0.97
TBC1D28Q2M2D7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.13■□□□□ 0.97
TBC1D28Q2M2D7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TBC1D28Q2M2D7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.12■□□□□ 0.97
TBC1D28Q2M2D7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TBC1D28Q2M2D7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TBC1D28Q2M2D7 AC093536.1-201ENST00000569153 554 ntBASIC21.12■□□□□ 0.97
TBC1D28Q2M2D7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TBC1D28Q2M2D7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
TBC1D28Q2M2D7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D28Q2M2D7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.1■□□□□ 0.97
TBC1D28Q2M2D7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D28Q2M2D7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TBC1D28Q2M2D7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TBC1D28Q2M2D7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D28Q2M2D7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TBC1D28Q2M2D7 ABHD17AP5-201ENST00000580133 923 ntBASIC21.08■□□□□ 0.97
TBC1D28Q2M2D7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TBC1D28Q2M2D7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.96
TBC1D28Q2M2D7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TBC1D28Q2M2D7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TBC1D28Q2M2D7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.05■□□□□ 0.96
TBC1D28Q2M2D7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D28Q2M2D7 AC026202.3-201ENST00000600805 1127 ntBASIC21.04■□□□□ 0.96
TBC1D28Q2M2D7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D28Q2M2D7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.04■□□□□ 0.96
TBC1D28Q2M2D7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.03■□□□□ 0.96
TBC1D28Q2M2D7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D28Q2M2D7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D28Q2M2D7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D28Q2M2D7 AC133552.2-201ENST00000619106 1032 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms