Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF140P52738 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.4■■□□□ 1.5
ZNF140P52738 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.4■■□□□ 1.5
ZNF140P52738 AC092803.2-201ENST00000564287 1899 ntBASIC24.4■■□□□ 1.5
ZNF140P52738 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.4■■□□□ 1.5
ZNF140P52738 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF140P52738 ECEL1P2-201ENST00000461596 1295 ntBASIC24.39■■□□□ 1.49
ZNF140P52738 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
ZNF140P52738 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.39■■□□□ 1.49
ZNF140P52738 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.39■■□□□ 1.49
ZNF140P52738 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ZNF140P52738 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZNF140P52738 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.37■■□□□ 1.49
ZNF140P52738 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.37■■□□□ 1.49
ZNF140P52738 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.37■■□□□ 1.49
ZNF140P52738 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZNF140P52738 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ZNF140P52738 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.37■■□□□ 1.49
ZNF140P52738 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZNF140P52738 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.36■■□□□ 1.49
ZNF140P52738 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.36■■□□□ 1.49
ZNF140P52738 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
ZNF140P52738 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZNF140P52738 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZNF140P52738 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
ZNF140P52738 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZNF140P52738 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.35■■□□□ 1.49
ZNF140P52738 SMPD5-203ENST00000639008 1464 ntBASIC24.35■■□□□ 1.49
ZNF140P52738 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.35■■□□□ 1.49
ZNF140P52738 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.35■■□□□ 1.49
ZNF140P52738 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ZNF140P52738 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF140P52738 AC145676.1-201ENST00000514988 2004 ntBASIC24.34■■□□□ 1.49
ZNF140P52738 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF140P52738 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF140P52738 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF140P52738 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.33■■□□□ 1.49
ZNF140P52738 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF140P52738 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
ZNF140P52738 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF140P52738 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF140P52738 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.33■■□□□ 1.49
ZNF140P52738 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.33■■□□□ 1.49
ZNF140P52738 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.33■■□□□ 1.49
ZNF140P52738 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF140P52738 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF140P52738 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF140P52738 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.32■■□□□ 1.48
ZNF140P52738 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.32■■□□□ 1.48
ZNF140P52738 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
ZNF140P52738 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ZNF140P52738 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF140P52738 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF140P52738 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF140P52738 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.31■■□□□ 1.48
ZNF140P52738 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.31■■□□□ 1.48
ZNF140P52738 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.31■■□□□ 1.48
ZNF140P52738 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF140P52738 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF140P52738 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.3■■□□□ 1.48
ZNF140P52738 MIR3960-201ENST00000583311 91 ntBASIC24.3■■□□□ 1.48
ZNF140P52738 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.3■■□□□ 1.48
ZNF140P52738 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF140P52738 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF140P52738 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.3■■□□□ 1.48
ZNF140P52738 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF140P52738 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.29■■□□□ 1.48
ZNF140P52738 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF140P52738 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZNF140P52738 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZNF140P52738 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.28■■□□□ 1.48
ZNF140P52738 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZNF140P52738 ERN1-208ENST00000606895 2068 ntBASIC24.28■■□□□ 1.48
ZNF140P52738 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.27■■□□□ 1.48
ZNF140P52738 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF140P52738 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
ZNF140P52738 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
ZNF140P52738 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF140P52738 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
ZNF140P52738 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF140P52738 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF140P52738 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.27■■□□□ 1.48
ZNF140P52738 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZNF140P52738 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.26■■□□□ 1.47
ZNF140P52738 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.26■■□□□ 1.47
ZNF140P52738 AC007029.1-201ENST00000604183 313 ntBASIC24.26■■□□□ 1.47
ZNF140P52738 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZNF140P52738 RNF126P1-201ENST00000567452 1320 ntBASIC24.26■■□□□ 1.47
ZNF140P52738 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.25■■□□□ 1.47
ZNF140P52738 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.25■■□□□ 1.47
ZNF140P52738 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZNF140P52738 AC010501.1-201ENST00000606270 1962 ntBASIC24.25■■□□□ 1.47
ZNF140P52738 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF140P52738 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF140P52738 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF140P52738 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
ZNF140P52738 HSD17B1P1-201ENST00000590052 955 ntBASIC24.24■■□□□ 1.47
ZNF140P52738 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF140P52738 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZNF140P52738 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms