Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SAA4P35542 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SAA4P35542 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SAA4P35542 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
SAA4P35542 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SAA4P35542 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SAA4P35542 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
SAA4P35542 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SAA4P35542 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA4P35542 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA4P35542 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SAA4P35542 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SAA4P35542 DUX4L9-201ENST00000449051 1259 ntBASIC19.76■□□□□ 0.75
SAA4P35542 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA4P35542 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SAA4P35542 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.76■□□□□ 0.75
SAA4P35542 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.75■□□□□ 0.75
SAA4P35542 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.75■□□□□ 0.75
SAA4P35542 DUX4L18-201ENST00000553347 1267 ntBASIC19.75■□□□□ 0.75
SAA4P35542 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SAA4P35542 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SAA4P35542 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.74■□□□□ 0.75
SAA4P35542 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SAA4P35542 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SAA4P35542 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SAA4P35542 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA4P35542 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA4P35542 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SAA4P35542 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA4P35542 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SAA4P35542 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA4P35542 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.73■□□□□ 0.75
SAA4P35542 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SAA4P35542 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SAA4P35542 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SAA4P35542 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA4P35542 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SAA4P35542 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA4P35542 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SAA4P35542 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA4P35542 SPCS2P3-201ENST00000500401 656 ntBASIC19.72■□□□□ 0.75
SAA4P35542 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA4P35542 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.72■□□□□ 0.75
SAA4P35542 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SAA4P35542 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.71■□□□□ 0.75
SAA4P35542 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.71■□□□□ 0.75
SAA4P35542 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.71■□□□□ 0.75
SAA4P35542 AC018755.3-202ENST00000596210 929 ntBASIC19.71■□□□□ 0.75
SAA4P35542 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SAA4P35542 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SAA4P35542 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.7■□□□□ 0.74
SAA4P35542 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA4P35542 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA4P35542 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SAA4P35542 MIR6765-201ENST00000614092 87 ntBASIC19.7■□□□□ 0.74
SAA4P35542 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SAA4P35542 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.7■□□□□ 0.74
SAA4P35542 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SAA4P35542 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA4P35542 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA4P35542 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA4P35542 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA4P35542 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SAA4P35542 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
SAA4P35542 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA4P35542 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SAA4P35542 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA4P35542 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SAA4P35542 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.68■□□□□ 0.74
SAA4P35542 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA4P35542 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SAA4P35542 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SAA4P35542 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.68■□□□□ 0.74
SAA4P35542 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.67■□□□□ 0.74
SAA4P35542 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.67■□□□□ 0.74
SAA4P35542 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.67■□□□□ 0.74
SAA4P35542 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.67■□□□□ 0.74
SAA4P35542 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SAA4P35542 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SAA4P35542 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms