Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CD40P25942 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
CD40P25942 SPCS2P3-201ENST00000500401 656 ntBASIC21.13■□□□□ 0.97
CD40P25942 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD40P25942 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.12■□□□□ 0.97
CD40P25942 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD40P25942 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CD40P25942 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CD40P25942 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD40P25942 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.11■□□□□ 0.97
CD40P25942 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.11■□□□□ 0.97
CD40P25942 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.11■□□□□ 0.97
CD40P25942 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.11■□□□□ 0.97
CD40P25942 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 AC018755.3-202ENST00000596210 929 ntBASIC21.1■□□□□ 0.97
CD40P25942 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.1■□□□□ 0.97
CD40P25942 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.1■□□□□ 0.97
CD40P25942 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD40P25942 AC142472.1-201ENST00000612013 1741 ntBASIC21.09■□□□□ 0.97
CD40P25942 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD40P25942 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD40P25942 MIR6765-201ENST00000614092 87 ntBASIC21.09■□□□□ 0.97
CD40P25942 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD40P25942 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CD40P25942 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD40P25942 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CD40P25942 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.08■□□□□ 0.97
CD40P25942 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CD40P25942 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.08■□□□□ 0.96
CD40P25942 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD40P25942 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD40P25942 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CD40P25942 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CD40P25942 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.07■□□□□ 0.96
CD40P25942 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.07■□□□□ 0.96
CD40P25942 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.07■□□□□ 0.96
CD40P25942 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CD40P25942 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CD40P25942 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD40P25942 AP004609.3-201ENST00000610705 1884 ntBASIC21.06■□□□□ 0.96
CD40P25942 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD40P25942 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD40P25942 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD40P25942 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD40P25942 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD40P25942 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.05■□□□□ 0.96
CD40P25942 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD40P25942 BHLHE23-202ENST00000612929 1109 ntBASIC21.04■□□□□ 0.96
CD40P25942 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CD40P25942 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD40P25942 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.03■□□□□ 0.96
CD40P25942 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CD40P25942 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CD40P25942 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CD40P25942 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD40P25942 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD40P25942 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
CD40P25942 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CD40P25942 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.02■□□□□ 0.96
CD40P25942 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.02■□□□□ 0.96
CD40P25942 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CD40P25942 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CD40P25942 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD40P25942 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD40P25942 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CD40P25942 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.01■□□□□ 0.95
CD40P25942 AC139795.1-202ENST00000500444 432 ntBASIC21.01■□□□□ 0.95
CD40P25942 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD40P25942 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CD40P25942 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CD40P25942 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD40P25942 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21■□□□□ 0.95
CD40P25942 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD40P25942 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21■□□□□ 0.95
CD40P25942 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD40P25942 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD40P25942 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD40P25942 AC074183.2-201ENST00000623112 922 ntBASIC20.99■□□□□ 0.95
CD40P25942 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD40P25942 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.98■□□□□ 0.95
CD40P25942 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD40P25942 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.97■□□□□ 0.95
CD40P25942 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CD40P25942 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD40P25942 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CD40P25942 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD40P25942 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD40P25942 RARRES2P1-201ENST00000474487 481 ntBASIC20.96■□□□□ 0.95
CD40P25942 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.96■□□□□ 0.95
CD40P25942 AC010980.1-201ENST00000587192 1142 ntBASIC20.96■□□□□ 0.95
CD40P25942 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD40P25942 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms