Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 OGG1YML060W 1131 nt5.62□□□□□ -1.51
CDC39P25655 YNR014WYNR014W 639 nt5.62□□□□□ -1.51
CDC39P25655 LYS21YDL131W 1323 nt5.61□□□□□ -1.51
CDC39P25655 PPM2YOL141W 2088 nt5.61□□□□□ -1.51
CDC39P25655 BSC4YNL269W 396 nt5.61□□□□□ -1.51
CDC39P25655 TMA46YOR091W 1038 nt5.61□□□□□ -1.51
CDC39P25655 PTC4YBR125C 1182 nt5.61□□□□□ -1.51
CDC39P25655 FAL1YDR021W 1200 nt5.6□□□□□ -1.51
CDC39P25655 HIS1YER055C 894 nt5.6□□□□□ -1.51
CDC39P25655 MSP1YGR028W 1089 nt5.6□□□□□ -1.51
CDC39P25655 RQC1YDR333C 2172 nt5.6□□□□□ -1.51
CDC39P25655 UIP4YPL186C 915 nt5.6□□□□□ -1.51
CDC39P25655 TAH11YJR046W 1815 nt5.6□□□□□ -1.51
CDC39P25655 RGD2YFL047W 2145 nt5.59□□□□□ -1.51
CDC39P25655 PMT3YOR321W 2262 nt5.59□□□□□ -1.51
CDC39P25655 NTG1YAL015C 1200 nt5.59□□□□□ -1.51
CDC39P25655 AMD2YDR242W 1650 nt5.59□□□□□ -1.51
CDC39P25655 YHK8YHR048W 1545 nt5.59□□□□□ -1.51
CDC39P25655 EDE1YBL047C 4146 nt5.59□□□□□ -1.51
CDC39P25655 YLR173WYLR173W 1827 nt5.59□□□□□ -1.51
CDC39P25655 ENV7YPL236C 1095 nt5.59□□□□□ -1.52
CDC39P25655 IVY1YDR229W 1362 nt5.59□□□□□ -1.52
CDC39P25655 MRPS28YDR337W 861 nt5.58□□□□□ -1.52
CDC39P25655 LYS1YIR034C 1122 nt5.58□□□□□ -1.52
CDC39P25655 YNL017CYNL017C 339 nt5.58□□□□□ -1.52
CDC39P25655 CCT8YJL008C 1707 nt5.58□□□□□ -1.52
CDC39P25655 UTR2YEL040W 1404 nt5.58□□□□□ -1.52
CDC39P25655 FBA1YKL060C 1080 nt5.57□□□□□ -1.52
CDC39P25655 ECM19YLR390W 339 nt5.57□□□□□ -1.52
CDC39P25655 SKY1YMR216C 2229 nt5.57□□□□□ -1.52
CDC39P25655 ECM27YJR106W 2178 nt5.57□□□□□ -1.52
CDC39P25655 GCV3YAL044C 513 nt5.56□□□□□ -1.52
CDC39P25655 VPS24YKL041W 675 nt5.56□□□□□ -1.52
CDC39P25655 MIA40YKL195W 1212 nt5.56□□□□□ -1.52
CDC39P25655 HEM1YDR232W 1647 nt5.56□□□□□ -1.52
CDC39P25655 ECM38YLR299W 1983 nt5.55□□□□□ -1.52
CDC39P25655 YTP1YNL237W 1380 nt5.55□□□□□ -1.52
CDC39P25655 MSB3YNL293W 1902 nt5.55□□□□□ -1.52
CDC39P25655 RVB2YPL235W 1416 nt5.55□□□□□ -1.52
CDC39P25655 YDR415CYDR415C 1125 nt5.55□□□□□ -1.52
CDC39P25655 YJR107WYJR107W 987 nt5.55□□□□□ -1.52
CDC39P25655 RPS28AYOR167C 204 nt5.55□□□□□ -1.52
CDC39P25655 ISC1YER019W 1434 nt5.55□□□□□ -1.52
CDC39P25655 TRR1YDR353W 960 nt5.54□□□□□ -1.52
CDC39P25655 YPT1YFL038C 621 nt5.54□□□□□ -1.52
CDC39P25655 COX10YPL172C 1389 nt5.54□□□□□ -1.52
CDC39P25655 YDR015CYDR015C 240 nt5.54□□□□□ -1.52
CDC39P25655 SYF2YGR129W 648 nt5.53□□□□□ -1.52
CDC39P25655 MEH1YKR007W 555 nt5.53□□□□□ -1.52
CDC39P25655 YKR032WYKR032W 315 nt5.53□□□□□ -1.52
CDC39P25655 ECM31YBR176W 939 nt5.53□□□□□ -1.52
CDC39P25655 AIM24YJR080C 1185 nt5.53□□□□□ -1.52
CDC39P25655 PEX31YGR004W 1389 nt5.52□□□□□ -1.53
CDC39P25655 PTC3YBL056W 1407 nt5.52□□□□□ -1.53
CDC39P25655 MLS1YNL117W 1665 nt5.52□□□□□ -1.53
CDC39P25655 YPL250W-AYPL250W-A 288 nt5.52□□□□□ -1.53
CDC39P25655 YPL257WYPL257W 582 nt5.52□□□□□ -1.53
CDC39P25655 YLR126CYLR126C 756 nt5.51□□□□□ -1.53
CDC39P25655 SMK1YPR054W 1167 nt5.51□□□□□ -1.53
CDC39P25655 RAD59YDL059C 717 nt5.51□□□□□ -1.53
CDC39P25655 EXG1YLR300W 1347 nt5.51□□□□□ -1.53
CDC39P25655 RUF23RUF23 254 nt5.51□□□□□ -1.53
CDC39P25655 YNL285WYNL285W 372 nt5.51□□□□□ -1.53
CDC39P25655 PPH22YDL188C 1134 nt5.5□□□□□ -1.53
CDC39P25655 SDH4YDR178W 546 nt5.5□□□□□ -1.53
CDC39P25655 YLR157W-EYLR157W-E 165 nt5.5□□□□□ -1.53
CDC39P25655 VTS1YOR359W 1572 nt5.5□□□□□ -1.53
CDC39P25655 YDL172CYDL172C 480 nt5.5□□□□□ -1.53
CDC39P25655 GPA2YER020W 1350 nt5.49□□□□□ -1.53
CDC39P25655 ECM14YHR132C 1293 nt5.49□□□□□ -1.53
CDC39P25655 CTF8YHR191C 402 nt5.49□□□□□ -1.53
CDC39P25655 YLR123CYLR123C 330 nt5.49□□□□□ -1.53
CDC39P25655 SHP1YBL058W 1272 nt5.49□□□□□ -1.53
CDC39P25655 YBR056C-BYBR056C-B 159 nt5.49□□□□□ -1.53
CDC39P25655 MNS1YJR131W 1650 nt5.49□□□□□ -1.53
CDC39P25655 RPP1YHR062C 882 nt5.48□□□□□ -1.53
CDC39P25655 YJR146WYJR146W 354 nt5.48□□□□□ -1.53
CDC39P25655 RPS3YNL178W 723 nt5.48□□□□□ -1.53
CDC39P25655 GLN3YER040W 2193 nt5.48□□□□□ -1.53
CDC39P25655 YDL085C-AYDL085C-A 207 nt5.48□□□□□ -1.53
CDC39P25655 ECM30YLR436C 3825 nt5.48□□□□□ -1.53
CDC39P25655 CRF1YDR223W 1404 nt5.48□□□□□ -1.53
CDC39P25655 YET3YDL072C 612 nt5.47□□□□□ -1.53
CDC39P25655 SUF5tG(CCC)O 72 nt5.47□□□□□ -1.53
CDC39P25655 TIF2YJL138C 1188 nt5.47□□□□□ -1.53
CDC39P25655 TIF1YKR059W 1188 nt5.47□□□□□ -1.53
CDC39P25655 AIM33YML087C 939 nt5.47□□□□□ -1.53
CDC39P25655 SKI2YLR398C 3864 nt5.47□□□□□ -1.53
CDC39P25655 ERP5YHR110W 639 nt5.47□□□□□ -1.53
CDC39P25655 EGD2YHR193C 525 nt5.47□□□□□ -1.53
CDC39P25655 SQT1YIR012W 1296 nt5.47□□□□□ -1.53
CDC39P25655 IRC11YOR013W 471 nt5.47□□□□□ -1.53
CDC39P25655 ADE17YMR120C 1779 nt5.46□□□□□ -1.53
CDC39P25655 EDC3YEL015W 1656 nt5.46□□□□□ -1.54
CDC39P25655 GLC8YMR311C 690 nt5.46□□□□□ -1.54
CDC39P25655 YCK1YHR135C 1617 nt5.46□□□□□ -1.54
CDC39P25655 IES2YNL215W 963 nt5.45□□□□□ -1.54
CDC39P25655 CRP1YHR146W 1398 nt5.45□□□□□ -1.54
CDC39P25655 SKS1YPL026C 1509 nt5.45□□□□□ -1.54
CDC39P25655 RSC4YKR008W 1878 nt5.45□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 10.5 ms