RNA–Protein interactions for RNA: YER040W

GLN3, Transcript of Transcriptional activator of genes regulated by nitrogen catabolite repression, yeastyeast

Gene GLN3, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GLN3YER040W BFR2Q06631 534 aaKnown RBP9.74□□□□□ -0.85
GLN3YER040W SPA2P23201 1466 aaKnown RBP9.58□□□□□ -0.88
GLN3YER040W NOP2P40991 618 aaKnown RBP9.58□□□□□ -0.88
GLN3YER040W SGS1P35187 1447 aa9.52□□□□□ -0.89
GLN3YER040W SSN2P38931 1420 aa9.46□□□□□ -0.89
GLN3YER040W NSR1P27476 414 aaKnown RBP RIP-Chip data9.4□□□□□ -0.91not detected
GLN3YER040W SKI3P17883 1432 aaKnown RBP9.3□□□□□ -0.92
GLN3YER040W DRS1P32892 752 aaKnown RBP9.27□□□□□ -0.93
GLN3YER040W RQC2Q12532 1038 aaKnown RBP9.24□□□□□ -0.93
GLN3YER040W CAB3P36076 571 aa9.05□□□□□ -0.96
GLN3YER040W EBP2P36049 427 aaKnown RBP9.03□□□□□ -0.96
GLN3YER040W INO80P53115 1489 aa8.95□□□□□ -0.98
GLN3YER040W RSE1Q04693 1361 aaKnown RBP8.89□□□□□ -0.99
GLN3YER040W YPR148CQ06523 435 aa8.88□□□□□ -0.99
GLN3YER040W MMS22Q06164 1454 aa8.86□□□□□ -0.99
GLN3YER040W ENP1P38333 483 aaKnown RBP8.83□□□□□ -1
GLN3YER040W CHD1P32657 1468 aa8.78□□□□□ -1
GLN3YER040W TCB3Q03640 1545 aaKnown RBP8.73□□□□□ -1.01
GLN3YER040W UFD4P33202 1483 aa8.73□□□□□ -1.01
GLN3YER040W XRN1P22147 1528 aaKnown RBP8.68□□□□□ -1.02
GLN3YER040W SPT7P35177 1332 aa8.65□□□□□ -1.02
GLN3YER040W SIS2P36024 562 aa8.65□□□□□ -1.02
GLN3YER040W POL5P39985 1022 aaKnown RBP8.65□□□□□ -1.02
GLN3YER040W TRM732Q03496 1420 aa8.63□□□□□ -1.03
GLN3YER040W STH1P32597 1359 aa8.63□□□□□ -1.03
GLN3YER040W SAS10Q12136 610 aaPredicted RBP8.62□□□□□ -1.03
GLN3YER040W TAF7Q05021 590 aa8.61□□□□□ -1.03
GLN3YER040W SPP41P38904 1435 aa8.6□□□□□ -1.03
GLN3YER040W IKI3Q06706 1349 aaKnown RBP8.6□□□□□ -1.03
GLN3YER040W PRS1P32895 427 aaKnown RBP8.57□□□□□ -1.04
GLN3YER040W MON2P48563 1636 aaPredicted RBP8.56□□□□□ -1.04
GLN3YER040W URN1Q06525 465 aaKnown RBP8.53□□□□□ -1.04
GLN3YER040W SEC3P33332 1336 aaKnown RBP8.51□□□□□ -1.05
GLN3YER040W SSM4P40318 1319 aa8.5□□□□□ -1.05
GLN3YER040W CLC1P17891 233 aa8.47□□□□□ -1.05
GLN3YER040W ECM5Q03214 1411 aa8.47□□□□□ -1.05
GLN3YER040W TFA1P36100 482 aa8.46□□□□□ -1.05
GLN3YER040W RTT106P40161 455 aa8.46□□□□□ -1.05
GLN3YER040W IME2P32581 645 aa8.46□□□□□ -1.06
GLN3YER040W MYO2P19524 1574 aaKnown RBP8.46□□□□□ -1.06
GLN3YER040W TCB2P48231 1178 aa8.45□□□□□ -1.06
GLN3YER040W LEU3P08638 886 aa8.45□□□□□ -1.06
GLN3YER040W HSL1P34244 1518 aa8.44□□□□□ -1.06
GLN3YER040W AVT3P36062 692 aa8.43□□□□□ -1.06
GLN3YER040W YFR016CP43597 1233 aaKnown RBP8.42□□□□□ -1.06
GLN3YER040W CFT1Q06632 1357 aaKnown RBP8.41□□□□□ -1.06
GLN3YER040W SPT6P23615 1451 aaKnown RBP8.41□□□□□ -1.06
GLN3YER040W MNN4P36044 1178 aa8.41□□□□□ -1.06
GLN3YER040W STU1P38198 1513 aa8.41□□□□□ -1.06
GLN3YER040W TAF2P23255 1407 aa8.39□□□□□ -1.07
GLN3YER040W YTA7P40340 1379 aa8.38□□□□□ -1.07
GLN3YER040W LEO1P38439 464 aa8.38□□□□□ -1.07
GLN3YER040W TY1B-DR4Q07793 1604 aa8.37□□□□□ -1.07
GLN3YER040W OPY1P38271 328 aa8.35□□□□□ -1.07
GLN3YER040W HIR3P47171 1648 aa8.35□□□□□ -1.07
GLN3YER040W SCC2Q04002 1493 aa8.35□□□□□ -1.07
GLN3YER040W BPT1P14772 1559 aa8.35□□□□□ -1.07
GLN3YER040W REV3P14284 1504 aa8.35□□□□□ -1.07
GLN3YER040W PDR10P51533 1564 aa8.34□□□□□ -1.07
GLN3YER040W BUD4P47136 1447 aa8.33□□□□□ -1.08
GLN3YER040W THO2P53552 1597 aaKnown RBP8.33□□□□□ -1.08
GLN3YER040W NUP170P38181 1502 aa8.33□□□□□ -1.08
GLN3YER040W RPC31P17890 251 aa8.32□□□□□ -1.08
GLN3YER040W EAF7P53911 425 aaKnown RBP8.31□□□□□ -1.08
GLN3YER040W PSD2P53037 1138 aaKnown RBP8.31□□□□□ -1.08
GLN3YER040W FUN12P39730 1002 aaKnown RBP8.29□□□□□ -1.08
GLN3YER040W SSK2P53599 1579 aa8.29□□□□□ -1.08
GLN3YER040W POL1P13382 1468 aa8.28□□□□□ -1.08
GLN3YER040W SRB8P25648 1427 aa8.28□□□□□ -1.08
GLN3YER040W AIM44Q99299 758 aa8.28□□□□□ -1.08
GLN3YER040W PEP1P32319 1579 aa8.27□□□□□ -1.09
GLN3YER040W PAN1P32521 1480 aa8.26□□□□□ -1.09
GLN3YER040W SIN3P22579 1536 aa8.26□□□□□ -1.09
GLN3YER040W YLR419WQ06698 1435 aaKnown RBP8.22□□□□□ -1.09
GLN3YER040W IFH1P39520 1085 aa8.22□□□□□ -1.09
GLN3YER040W SNF7P39929 240 aaKnown RBP8.21□□□□□ -1.09
GLN3YER040W MLP2P40457 1679 aa8.21□□□□□ -1.1
GLN3YER040W ESP1Q03018 1630 aa8.19□□□□□ -1.1
GLN3YER040W TOP2P06786 1428 aaKnown RBP8.18□□□□□ -1.1
GLN3YER040W SMC4Q12267 1418 aa8.18□□□□□ -1.1
GLN3YER040W FPR3P38911 411 aaKnown RBP8.17□□□□□ -1.1
GLN3YER040W TSC11P40061 1430 aa8.17□□□□□ -1.1
GLN3YER040W CWC22P53333 577 aaKnown RBP8.16□□□□□ -1.1
GLN3YER040W QCR6P00127 147 aa8.15□□□□□ -1.1
GLN3YER040W ROX1P25042 368 aa8.14□□□□□ -1.11
GLN3YER040W ORC1P54784 914 aaPredicted RBP8.14□□□□□ -1.11
GLN3YER040W MYO4P32492 1471 aa8.13□□□□□ -1.11
GLN3YER040W SNQ2P32568 1501 aaKnown RBP8.13□□□□□ -1.11
GLN3YER040W DNA2P38859 1522 aa8.13□□□□□ -1.11
GLN3YER040W YGR130CP53278 816 aa8.13□□□□□ -1.11
GLN3YER040W YCF1P39109 1515 aaKnown RBP8.13□□□□□ -1.11
GLN3YER040W GEA1P47102 1408 aaPredicted RBP8.12□□□□□ -1.11
GLN3YER040W RPS0BP46654 252 aaKnown RBP8.11□□□□□ -1.11
GLN3YER040W PAF1P38351 445 aa8.1□□□□□ -1.11
GLN3YER040W YOR1P53049 1477 aa8.1□□□□□ -1.11
GLN3YER040W SPT21P35209 758 aa8.1□□□□□ -1.11
GLN3YER040W DJP1P40564 432 aa8.1□□□□□ -1.11
GLN3YER040W SWR1Q05471 1514 aa8.09□□□□□ -1.11
GLN3YER040W SLN1P39928 1220 aaPredicted RBP8.09□□□□□ -1.11
GLN3YER040W MHP1P43638 1398 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms