Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC14.4□□□□□ -0.15e-6■■■■□ 25.4
XRCC6P12956 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.144e-6■■■■□ 25.4
XRCC6P12956 RBM6-213ENST00000454079 4324 ntTSL 213.93□□□□□ -0.187e-10■■■■□ 25.4
XRCC6P12956 DDB2-215ENST00000622090 580 ntTSL 513.65□□□□□ -0.224e-6■■■■□ 25.4
XRCC6P12956 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■■■■□ 25.4
XRCC6P12956 DDB2-205ENST00000610805 793 ntTSL 513.08□□□□□ -0.324e-6■■■■□ 25.4
XRCC6P12956 DDB2-208ENST00000614825 852 ntTSL 312.86□□□□□ -0.354e-6■■■■□ 25.4
XRCC6P12956 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC12.74□□□□□ -0.374e-6■■■■□ 25.4
XRCC6P12956 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC12.74□□□□□ -0.374e-6■■■■□ 25.4
XRCC6P12956 DDB2-211ENST00000616278 960 ntTSL 212.74□□□□□ -0.374e-6■■■■□ 25.4
XRCC6P12956 VPS37A-202ENST00000425020 4051 ntTSL 212.33□□□□□ -0.434e-6■■■■□ 25.4
XRCC6P12956 VPS37A-210ENST00000521829 1307 ntTSL 1 (best) BASIC12.12□□□□□ -0.474e-6■■■■□ 25.4
XRCC6P12956 DDB2-210ENST00000615695 897 ntTSL 211.8□□□□□ -0.524e-6■■■■□ 25.4
XRCC6P12956 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.682e-11■■■■□ 25.4
XRCC6P12956 DDB2-206ENST00000612309 3101 ntTSL 210.65□□□□□ -0.74e-6■■■■□ 25.4
XRCC6P12956 ARHGAP5-208ENST00000555814 583 ntTSL 410.59□□□□□ -0.714e-6■■■■□ 25.4
XRCC6P12956 RBM6-207ENST00000434592 2342 ntTSL 27.63□□□□□ -1.197e-10■■■■□ 25.4
XRCC6P12956 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.82□□□□□ -1.324e-6■■■■□ 25.4
XRCC6P12956 CADM1-214ENST00000543249 565 ntTSL 46.62□□□□□ -1.352e-11■■■■□ 25.4
XRCC6P12956 RBM6-214ENST00000464013 397 ntTSL 55.4□□□□□ -1.544e-6■■■■□ 25.4
XRCC6P12956 ARHGAP5-209ENST00000556191 654 ntTSL 43.55□□□□□ -1.844e-6■■■■□ 25.4
XRCC6P12956 ATXN1-206ENST00000483591 892 ntTSL 1 (best)8.95□□□□□ -0.985e-6■■■■□ 25.2
XRCC6P12956 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)8.12□□□□□ -1.115e-6■■■■□ 25.2
XRCC6P12956 ATXN1-209ENST00000495178 853 ntTSL 1 (best)3.82□□□□□ -1.85e-6■■■■□ 25.2
XRCC6P12956 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)27.08■■□□□ 1.921e-6■■■■□ 25.2
XRCC6P12956 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.991e-6■■■■□ 25.2
XRCC6P12956 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-6■■■■□ 25.1
XRCC6P12956 GPCPD1-202ENST00000418646 4015 ntTSL 55.66□□□□□ -1.52e-6■■■■□ 25.1
XRCC6P12956 GPCPD1-207ENST00000633552 571 ntTSL 55.36□□□□□ -1.552e-6■■■■□ 25.1
XRCC6P12956 GPCPD1-205ENST00000481038 6649 ntTSL 25.3□□□□□ -1.562e-6■■■■□ 25.1
XRCC6P12956 GPCPD1-204ENST00000473797 342 ntTSL 54.64□□□□□ -1.672e-6■■■■□ 25.1
XRCC6P12956 SH2B3-203ENST00000550925 648 ntTSL 523.25■■□□□ 1.311e-8■■■■□ 25.1
XRCC6P12956 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.141e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-207ENST00000553730 1227 ntTSL 221.22■□□□□ 0.991e-8■■■■□ 25.1
XRCC6P12956 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.82■□□□□ 0.921e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-208ENST00000598235 882 ntTSL 520.52■□□□□ 0.881e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-211ENST00000601533 573 ntTSL 220.28■□□□□ 0.841e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-203ENST00000594099 995 ntTSL 418.95■□□□□ 0.621e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.621e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-207ENST00000596853 593 ntTSL 418.78■□□□□ 0.61e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-206ENST00000596075 573 ntTSL 416.77■□□□□ 0.281e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-209ENST00000598692 567 ntTSL 214.06□□□□□ -0.161e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-202ENST00000334743 4328 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.351e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC12.83□□□□□ -0.361e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-209ENST00000553890 492 ntTSL 312.83□□□□□ -0.361e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-203ENST00000350249 3845 ntTSL 1 (best) BASIC12.7□□□□□ -0.381e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC11.41□□□□□ -0.581e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-204ENST00000595139 569 ntTSL 49.93□□□□□ -0.821e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-208ENST00000553842 421 ntTSL 39.5□□□□□ -0.891e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC9.41□□□□□ -0.91e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.25□□□□□ -0.931e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-220ENST00000556373 285 ntTSL 58.39□□□□□ -1.071e-8■■■■□ 25.1
XRCC6P12956 DNAJB1-205ENST00000595992 601 ntTSL 26.87□□□□□ -1.311e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-221ENST00000556493 457 ntTSL 46.33□□□□□ -1.41e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-229ENST00000557621 759 ntTSL 56.2□□□□□ -1.421e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-219ENST00000556307 601 ntTSL 35.21□□□□□ -1.581e-8■■■■□ 25.1
XRCC6P12956 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.92□□□□□ -1.621e-8■■■■□ 25.1
XRCC6P12956 CPSF6-205ENST00000550075 540 ntTSL 428.96■■■□□ 2.239e-12■■■■□ 25
XRCC6P12956 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.04■□□□□ 0.489e-12■■■■□ 25
XRCC6P12956 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC15.74■□□□□ 0.119e-12■■■■□ 25
XRCC6P12956 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.869e-12■■■■□ 25
XRCC6P12956 CPSF6-206ENST00000550987 560 ntTSL 46.17□□□□□ -1.429e-12■■■■□ 25
XRCC6P12956 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.64□□□□□ -1.999e-12■■■■□ 25
XRCC6P12956 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.87□□□□□ -0.031e-17■■■■□ 24.9
XRCC6P12956 MED15-210ENST00000432052 598 ntTSL 423.69■■□□□ 1.388e-8■■■■□ 24.8
XRCC6P12956 MED15-225ENST00000477824 571 ntTSL 523.28■■□□□ 1.328e-8■■■■□ 24.8
XRCC6P12956 MED15-215ENST00000444094 551 ntTSL 422.1■■□□□ 1.138e-8■■■■□ 24.8
XRCC6P12956 MED15-218ENST00000451058 418 ntTSL 321.31■■□□□ 18e-8■■■■□ 24.8
XRCC6P12956 MED15-205ENST00000414658 717 ntTSL 320.79■□□□□ 0.928e-8■■■■□ 24.8
XRCC6P12956 MED15-221ENST00000473028 556 ntTSL 419.63■□□□□ 0.738e-8■■■■□ 24.8
XRCC6P12956 MED15-207ENST00000423862 581 ntTSL 319.48■□□□□ 0.718e-8■■■■□ 24.8
XRCC6P12956 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.668e-8■■■■□ 24.8
XRCC6P12956 MED15-214ENST00000441501 840 ntTSL 319.04■□□□□ 0.648e-8■■■■□ 24.8
XRCC6P12956 MED15-224ENST00000476767 590 ntTSL 418.28■□□□□ 0.528e-8■■■■□ 24.8
XRCC6P12956 MED15-208ENST00000424287 589 ntTSL 418.28■□□□□ 0.528e-8■■■■□ 24.8
XRCC6P12956 MED15-211ENST00000433831 3267 ntTSL 518.17■□□□□ 0.58e-8■■■■□ 24.8
XRCC6P12956 MED15-206ENST00000420849 430 ntTSL 318.07■□□□□ 0.488e-8■■■■□ 24.8
XRCC6P12956 MED15-216ENST00000445189 596 ntTSL 418.07■□□□□ 0.488e-8■■■■□ 24.8
XRCC6P12956 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.9■□□□□ 0.468e-8■■■■□ 24.8
XRCC6P12956 MED15-217ENST00000445987 590 ntTSL 417.88■□□□□ 0.458e-8■■■■□ 24.8
XRCC6P12956 MED15-219ENST00000457322 623 ntTSL 417.88■□□□□ 0.458e-8■■■■□ 24.8
XRCC6P12956 MED15-228ENST00000487550 587 ntTSL 317.25■□□□□ 0.358e-8■■■■□ 24.8
XRCC6P12956 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.01■□□□□ 0.318e-8■■■■□ 24.8
XRCC6P12956 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.28e-8■■■■□ 24.8
XRCC6P12956 MED15-230ENST00000492381 3619 ntTSL 213.31□□□□□ -0.288e-8■■■■□ 24.8
XRCC6P12956 MED15-209ENST00000428629 572 ntTSL 410.09□□□□□ -0.798e-8■■■■□ 24.8
XRCC6P12956 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.65e-9■■■■□ 24.7
XRCC6P12956 SLC38A2-208ENST00000549258 4384 ntTSL 24.91□□□□□ -1.625e-9■■■■□ 24.7
XRCC6P12956 LAMA5-212ENST00000495695 780 ntTSL 222.06■■□□□ 1.125e-8■■■■□ 24.7
XRCC6P12956 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)17.46■□□□□ 0.395e-8■■■■□ 24.7
XRCC6P12956 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.457e-9■■■■□ 24.6
XRCC6P12956 DDX5-228ENST00000584279 676 ntTSL 322.37■■□□□ 1.173e-7■■■■□ 24.6
XRCC6P12956 DDX5-232ENST00000585111 1051 ntTSL 217.09■□□□□ 0.333e-7■■■■□ 24.6
XRCC6P12956 DDX5-233ENST00000585223 699 ntTSL 212.42□□□□□ -0.423e-7■■■■□ 24.6
XRCC6P12956 DDX5-231ENST00000585060 572 ntTSL 410.34□□□□□ -0.753e-7■■■■□ 24.6
XRCC6P12956 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.072e-8■■■■□ 24.5
XRCC6P12956 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.022e-8■■■■□ 24.5
XRCC6P12956 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.792e-8■■■■□ 24.5
XRCC6P12956 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC13.09□□□□□ -0.312e-8■■■■□ 24.5
XRCC6P12956 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.86□□□□□ -1.472e-8■■■■□ 24.5
Retrieved 100 of 6,788 protein–RNA pairs in 106.1 ms