RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 NISCHQ9Y2I1 1504 aa18.09■□□□□ 0.49
VPS37A-202ENST00000425020 DCAF8L2P0C7V8 631 aa18.08■□□□□ 0.49
VPS37A-202ENST00000425020 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
VPS37A-202ENST00000425020 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
VPS37A-202ENST00000425020 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
VPS37A-202ENST00000425020 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
VPS37A-202ENST00000425020 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
VPS37A-202ENST00000425020 TTBK1Q5TCY1 1321 aaPredicted RBP16.47■□□□□ 0.23
VPS37A-202ENST00000425020 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
VPS37A-202ENST00000425020 LOC105371045A0A1W2PR82 267 aa16.19■□□□□ 0.18
VPS37A-202ENST00000425020 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
VPS37A-202ENST00000425020 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
VPS37A-202ENST00000425020 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
VPS37A-202ENST00000425020 HRCP23327 699 aa15.95■□□□□ 0.14
VPS37A-202ENST00000425020 CCER1Q8TC90 406 aaPredicted RBP15.9■□□□□ 0.14
VPS37A-202ENST00000425020 APLP2Q06481 763 aa15.82■□□□□ 0.12
VPS37A-202ENST00000425020 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
VPS37A-202ENST00000425020 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
VPS37A-202ENST00000425020 YTHDC1Q96MU7 727 aaKnown RBP15.73■□□□□ 0.11
VPS37A-202ENST00000425020 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
VPS37A-202ENST00000425020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.58■□□□□ 0.08
VPS37A-202ENST00000425020 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
VPS37A-202ENST00000425020 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
VPS37A-202ENST00000425020 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
VPS37A-202ENST00000425020 ITGAEP38570 1179 aa15.43■□□□□ 0.06
VPS37A-202ENST00000425020 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
VPS37A-202ENST00000425020 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS37A-202ENST00000425020 ABCC9O60706 1549 aa15.28■□□□□ 0.04
VPS37A-202ENST00000425020 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
VPS37A-202ENST00000425020 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
VPS37A-202ENST00000425020 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
VPS37A-202ENST00000425020 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0
VPS37A-202ENST00000425020 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
VPS37A-202ENST00000425020 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
VPS37A-202ENST00000425020 NEFLP07196 543 aa14.94□□□□□ -0.02
VPS37A-202ENST00000425020 NEUROD1Q13562 356 aa14.91□□□□□ -0.02
VPS37A-202ENST00000425020 BCANQ96GW7 911 aa14.9□□□□□ -0.02
VPS37A-202ENST00000425020 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
VPS37A-202ENST00000425020 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
VPS37A-202ENST00000425020 FAM50AQ14320 339 aaKnown RBP14.89□□□□□ -0.03
VPS37A-202ENST00000425020 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
VPS37A-202ENST00000425020 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
VPS37A-202ENST00000425020 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
VPS37A-202ENST00000425020 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
VPS37A-202ENST00000425020 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
VPS37A-202ENST00000425020 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
VPS37A-202ENST00000425020 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
VPS37A-202ENST00000425020 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
VPS37A-202ENST00000425020 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
VPS37A-202ENST00000425020 MIER1Q8N108 512 aa14.63□□□□□ -0.07
VPS37A-202ENST00000425020 HIRIP3Q9BW71 556 aaPredicted RBP14.61□□□□□ -0.07
VPS37A-202ENST00000425020 ZNF326Q5BKZ1 582 aaKnown RBP14.59□□□□□ -0.07
VPS37A-202ENST00000425020 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
VPS37A-202ENST00000425020 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
VPS37A-202ENST00000425020 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
VPS37A-202ENST00000425020 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
VPS37A-202ENST00000425020 ANP32CO43423 234 aa14.48□□□□□ -0.09
VPS37A-202ENST00000425020 MYT1Q01538 1121 aa14.46□□□□□ -0.09
VPS37A-202ENST00000425020 FBLN2P98095 1184 aa14.45□□□□□ -0.1
VPS37A-202ENST00000425020 CEP162Q5TB80 1403 aa14.44□□□□□ -0.1
VPS37A-202ENST00000425020 FKBP8Q14318 412 aa14.43□□□□□ -0.1
VPS37A-202ENST00000425020 SENP3-EIF4A1A0A087X0R7 540 aa14.41□□□□□ -0.1
VPS37A-202ENST00000425020 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
VPS37A-202ENST00000425020 CLIP1P30622 1438 aa14.38□□□□□ -0.11
VPS37A-202ENST00000425020 SOGA1O94964 1423 aa14.36□□□□□ -0.11
VPS37A-202ENST00000425020 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
VPS37A-202ENST00000425020 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
VPS37A-202ENST00000425020 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
VPS37A-202ENST00000425020 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
VPS37A-202ENST00000425020 HNRNPUQ00839 825 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS37A-202ENST00000425020 FAM9BQ8IZU0 186 aa14.29□□□□□ -0.12
VPS37A-202ENST00000425020 SALL2Q9Y467 1007 aaPredicted RBP14.29□□□□□ -0.12
VPS37A-202ENST00000425020 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.13
VPS37A-202ENST00000425020 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
VPS37A-202ENST00000425020 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
VPS37A-202ENST00000425020 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
VPS37A-202ENST00000425020 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
VPS37A-202ENST00000425020 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
VPS37A-202ENST00000425020 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
VPS37A-202ENST00000425020 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
VPS37A-202ENST00000425020 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
VPS37A-202ENST00000425020 TNIKQ9UKE5 1360 aa14.21□□□□□ -0.14
VPS37A-202ENST00000425020 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
VPS37A-202ENST00000425020 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
VPS37A-202ENST00000425020 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
VPS37A-202ENST00000425020 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
VPS37A-202ENST00000425020 NPM2Q86SE8 214 aaKnown RBP14.15□□□□□ -0.14
VPS37A-202ENST00000425020 RTL5Q5HYW3 569 aaPredicted RBP14.13□□□□□ -0.15
VPS37A-202ENST00000425020 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
VPS37A-202ENST00000425020 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
VPS37A-202ENST00000425020 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.16
VPS37A-202ENST00000425020 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
VPS37A-202ENST00000425020 SUPT16HQ9Y5B9 1047 aaKnown RBP14.05□□□□□ -0.16
VPS37A-202ENST00000425020 WIZO95785 1651 aa14.05□□□□□ -0.16
VPS37A-202ENST00000425020 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
VPS37A-202ENST00000425020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■□□□ 13.8
VPS37A-202ENST00000425020 EEA1Q15075 1411 aa14.04□□□□□ -0.16
VPS37A-202ENST00000425020 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
VPS37A-202ENST00000425020 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
VPS37A-202ENST00000425020 NBR1Q14596 966 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms