Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LONRF2P2-201ENST00000439212 571 ntBASIC26.23■■□□□ 1.79
RB1P06400 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.23■■□□□ 1.79
RB1P06400 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.23■■□□□ 1.79
RB1P06400 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RB1P06400 WHAMMP3-201ENST00000611636 1609 ntBASIC26.22■■□□□ 1.79
RB1P06400 RPS2P7-201ENST00000447334 885 ntBASIC26.22■■□□□ 1.79
RB1P06400 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.22■■□□□ 1.79
RB1P06400 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RB1P06400 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.21■■□□□ 1.79
RB1P06400 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RB1P06400 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RB1P06400 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RB1P06400 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RB1P06400 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RB1P06400 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.21■■□□□ 1.79
RB1P06400 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RB1P06400 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RB1P06400 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RB1P06400 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.2■■□□□ 1.78
RB1P06400 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.2■■□□□ 1.78
RB1P06400 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.2■■□□□ 1.78
RB1P06400 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RB1P06400 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RB1P06400 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RB1P06400 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RB1P06400 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.19■■□□□ 1.78
RB1P06400 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
RB1P06400 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RB1P06400 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.19■■□□□ 1.78
RB1P06400 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RB1P06400 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RB1P06400 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.18■■□□□ 1.78
RB1P06400 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.18■■□□□ 1.78
RB1P06400 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.18■■□□□ 1.78
RB1P06400 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RB1P06400 AC008406.3-201ENST00000620001 1374 ntBASIC26.18■■□□□ 1.78
RB1P06400 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.17■■□□□ 1.78
RB1P06400 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.17■■□□□ 1.78
RB1P06400 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RB1P06400 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RB1P06400 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RB1P06400 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RB1P06400 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RB1P06400 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RB1P06400 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RB1P06400 KRT125P-201ENST00000546827 989 ntBASIC26.14■■□□□ 1.78
RB1P06400 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.14■■□□□ 1.78
RB1P06400 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.14■■□□□ 1.78
RB1P06400 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RB1P06400 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.13■■□□□ 1.77
RB1P06400 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RB1P06400 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.13■■□□□ 1.77
RB1P06400 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RB1P06400 AC022616.5-201ENST00000518796 181 ntBASIC26.13■■□□□ 1.77
RB1P06400 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 KRT18P10-201ENST00000388836 1287 ntBASIC26.12■■□□□ 1.77
RB1P06400 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.12■■□□□ 1.77
RB1P06400 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RB1P06400 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.11■■□□□ 1.77
RB1P06400 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.11■■□□□ 1.77
RB1P06400 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RB1P06400 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.11■■□□□ 1.77
RB1P06400 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.1■■□□□ 1.77
RB1P06400 BX664725.1-201ENST00000438252 379 ntBASIC26.1■■□□□ 1.77
RB1P06400 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
RB1P06400 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.09■■□□□ 1.77
RB1P06400 MIR4787-201ENST00000607364 84 ntBASIC26.09■■□□□ 1.77
RB1P06400 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RB1P06400 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RB1P06400 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RB1P06400 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.08■■□□□ 1.77
RB1P06400 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
RB1P06400 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.08■■□□□ 1.77
RB1P06400 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RB1P06400 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
RB1P06400 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
RB1P06400 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RB1P06400 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RB1P06400 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RB1P06400 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.07■■□□□ 1.76
RB1P06400 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RB1P06400 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RB1P06400 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
RB1P06400 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.06■■□□□ 1.76
RB1P06400 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RB1P06400 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
RB1P06400 MIR935-201ENST00000401179 91 ntBASIC26.05■■□□□ 1.76
RB1P06400 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.05■■□□□ 1.76
RB1P06400 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RB1P06400 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms