Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC074183.2-201ENST00000623112 922 ntBASIC29.78■■■□□ 2.36
COL1A1P02452 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
COL1A1P02452 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL1A1P02452 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.76■■■□□ 2.35
COL1A1P02452 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL1A1P02452 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A1P02452 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A1P02452 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL1A1P02452 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.74■■■□□ 2.35
COL1A1P02452 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.74■■■□□ 2.35
COL1A1P02452 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL1A1P02452 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.74■■■□□ 2.35
COL1A1P02452 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
COL1A1P02452 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
COL1A1P02452 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
COL1A1P02452 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
COL1A1P02452 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.73■■■□□ 2.35
COL1A1P02452 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
COL1A1P02452 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
COL1A1P02452 MIR6765-201ENST00000614092 87 ntBASIC29.72■■■□□ 2.35
COL1A1P02452 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A1P02452 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A1P02452 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.71■■■□□ 2.35
COL1A1P02452 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A1P02452 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
COL1A1P02452 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.71■■■□□ 2.35
COL1A1P02452 AC142086.6-201ENST00000621154 1765 ntBASIC29.7■■■□□ 2.35
COL1A1P02452 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
COL1A1P02452 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
COL1A1P02452 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.7■■■□□ 2.35
COL1A1P02452 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.7■■■□□ 2.35
COL1A1P02452 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
COL1A1P02452 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
COL1A1P02452 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.69■■■□□ 2.34
COL1A1P02452 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.69■■■□□ 2.34
COL1A1P02452 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL1A1P02452 AC010980.1-201ENST00000587192 1142 ntBASIC29.69■■■□□ 2.34
COL1A1P02452 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.69■■■□□ 2.34
COL1A1P02452 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.69■■■□□ 2.34
COL1A1P02452 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL1A1P02452 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.68■■■□□ 2.34
COL1A1P02452 AC009299.2-201ENST00000482477 511 ntBASIC29.68■■■□□ 2.34
COL1A1P02452 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC29.68■■■□□ 2.34
COL1A1P02452 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL1A1P02452 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL1A1P02452 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.68■■■□□ 2.34
COL1A1P02452 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
COL1A1P02452 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL1A1P02452 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.67■■■□□ 2.34
COL1A1P02452 PVT1_1.1-201ENST00000615125 194 ntBASIC29.67■■■□□ 2.34
COL1A1P02452 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL1A1P02452 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL1A1P02452 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.66■■■□□ 2.34
COL1A1P02452 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL1A1P02452 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
COL1A1P02452 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.65■■■□□ 2.34
COL1A1P02452 AC139795.1-202ENST00000500444 432 ntBASIC29.65■■■□□ 2.34
COL1A1P02452 BHLHE23-202ENST00000612929 1109 ntBASIC29.65■■■□□ 2.34
COL1A1P02452 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL1A1P02452 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
COL1A1P02452 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL1A1P02452 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
COL1A1P02452 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL1A1P02452 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL1A1P02452 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL1A1P02452 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL1A1P02452 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL1A1P02452 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.62■■■□□ 2.33
COL1A1P02452 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL1A1P02452 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.62■■■□□ 2.33
COL1A1P02452 KRT8P33-201ENST00000508125 1423 ntBASIC29.62■■■□□ 2.33
COL1A1P02452 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
COL1A1P02452 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
COL1A1P02452 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL1A1P02452 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL1A1P02452 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
COL1A1P02452 AC142472.1-201ENST00000612013 1741 ntBASIC29.61■■■□□ 2.33
COL1A1P02452 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.61■■■□□ 2.33
COL1A1P02452 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.61■■■□□ 2.33
COL1A1P02452 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
COL1A1P02452 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.61■■■□□ 2.33
COL1A1P02452 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.6■■■□□ 2.33
COL1A1P02452 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL1A1P02452 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.6■■■□□ 2.33
COL1A1P02452 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.6■■■□□ 2.33
COL1A1P02452 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
COL1A1P02452 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
COL1A1P02452 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.6■■■□□ 2.33
COL1A1P02452 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
COL1A1P02452 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms