Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSPG5O95196 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.26■■□□□ 1.79
CSPG5O95196 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CSPG5O95196 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.25■■□□□ 1.79
CSPG5O95196 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CSPG5O95196 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.25■■□□□ 1.79
CSPG5O95196 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CSPG5O95196 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CSPG5O95196 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CSPG5O95196 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSPG5O95196 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
CSPG5O95196 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.24■■□□□ 1.79
CSPG5O95196 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CSPG5O95196 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CSPG5O95196 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.24■■□□□ 1.79
CSPG5O95196 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CSPG5O95196 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.24■■□□□ 1.79
CSPG5O95196 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSPG5O95196 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CSPG5O95196 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.23■■□□□ 1.79
CSPG5O95196 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
CSPG5O95196 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CSPG5O95196 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CSPG5O95196 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CSPG5O95196 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.23■■□□□ 1.79
CSPG5O95196 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.23■■□□□ 1.79
CSPG5O95196 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CSPG5O95196 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CSPG5O95196 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CSPG5O95196 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CSPG5O95196 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
CSPG5O95196 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CSPG5O95196 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.22■■□□□ 1.79
CSPG5O95196 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CSPG5O95196 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.21■■□□□ 1.79
CSPG5O95196 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CSPG5O95196 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSPG5O95196 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CSPG5O95196 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSPG5O95196 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSPG5O95196 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CSPG5O95196 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSPG5O95196 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CSPG5O95196 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.18■■□□□ 1.78
CSPG5O95196 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.18■■□□□ 1.78
CSPG5O95196 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.18■■□□□ 1.78
CSPG5O95196 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.17■■□□□ 1.78
CSPG5O95196 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.17■■□□□ 1.78
CSPG5O95196 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.17■■□□□ 1.78
CSPG5O95196 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CSPG5O95196 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.16■■□□□ 1.78
CSPG5O95196 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CSPG5O95196 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CSPG5O95196 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSPG5O95196 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CSPG5O95196 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSPG5O95196 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CSPG5O95196 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.14■■□□□ 1.78
CSPG5O95196 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CSPG5O95196 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CSPG5O95196 WHAMMP3-201ENST00000611636 1609 ntBASIC26.14■■□□□ 1.77
CSPG5O95196 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSPG5O95196 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.13■■□□□ 1.77
CSPG5O95196 MIR935-201ENST00000401179 91 ntBASIC26.13■■□□□ 1.77
CSPG5O95196 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CSPG5O95196 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.13■■□□□ 1.77
CSPG5O95196 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CSPG5O95196 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSPG5O95196 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CSPG5O95196 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.13■■□□□ 1.77
CSPG5O95196 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.13■■□□□ 1.77
CSPG5O95196 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CSPG5O95196 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSPG5O95196 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSPG5O95196 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.12■■□□□ 1.77
CSPG5O95196 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CSPG5O95196 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSPG5O95196 AC008406.3-201ENST00000620001 1374 ntBASIC26.11■■□□□ 1.77
CSPG5O95196 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSPG5O95196 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CSPG5O95196 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CSPG5O95196 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CSPG5O95196 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
CSPG5O95196 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.1■■□□□ 1.77
CSPG5O95196 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.1■■□□□ 1.77
CSPG5O95196 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.1■■□□□ 1.77
CSPG5O95196 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CSPG5O95196 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSPG5O95196 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.09■■□□□ 1.77
CSPG5O95196 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.09■■□□□ 1.77
CSPG5O95196 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.09■■□□□ 1.77
CSPG5O95196 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSPG5O95196 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CSPG5O95196 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.09■■□□□ 1.77
CSPG5O95196 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms