Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
URB1O60287 AC110285.6-201ENST00000617652 491 ntBASIC23.17■■□□□ 1.3
URB1O60287 AC087393.1-201ENST00000582896 145 ntBASIC23.17■■□□□ 1.3
URB1O60287 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
URB1O60287 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
URB1O60287 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.16■■□□□ 1.3
URB1O60287 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
URB1O60287 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.16■■□□□ 1.3
URB1O60287 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.16■■□□□ 1.3
URB1O60287 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
URB1O60287 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.15■■□□□ 1.3
URB1O60287 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
URB1O60287 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.15■■□□□ 1.3
URB1O60287 AC100797.4-201ENST00000631653 1827 ntBASIC23.15■■□□□ 1.3
URB1O60287 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.15■■□□□ 1.3
URB1O60287 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
URB1O60287 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
URB1O60287 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
URB1O60287 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
URB1O60287 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.13■■□□□ 1.29
URB1O60287 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
URB1O60287 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.12■■□□□ 1.29
URB1O60287 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.12■■□□□ 1.29
URB1O60287 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
URB1O60287 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.12■■□□□ 1.29
URB1O60287 AC005837.3-201ENST00000612163 286 ntBASIC23.11■■□□□ 1.29
URB1O60287 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
URB1O60287 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.11■■□□□ 1.29
URB1O60287 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
URB1O60287 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.1■■□□□ 1.29
URB1O60287 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
URB1O60287 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
URB1O60287 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.1■■□□□ 1.29
URB1O60287 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.1■■□□□ 1.29
URB1O60287 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
URB1O60287 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.09■■□□□ 1.29
URB1O60287 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
URB1O60287 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
URB1O60287 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.09■■□□□ 1.29
URB1O60287 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.09■■□□□ 1.29
URB1O60287 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.09■■□□□ 1.29
URB1O60287 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
URB1O60287 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
URB1O60287 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
URB1O60287 AC022616.5-201ENST00000518796 181 ntBASIC23.08■■□□□ 1.29
URB1O60287 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
URB1O60287 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
URB1O60287 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
URB1O60287 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
URB1O60287 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
URB1O60287 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
URB1O60287 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.06■■□□□ 1.28
URB1O60287 AC092666.2-201ENST00000613287 246 ntBASIC23.06■■□□□ 1.28
URB1O60287 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
URB1O60287 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
URB1O60287 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
URB1O60287 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
URB1O60287 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.06■■□□□ 1.28
URB1O60287 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.05■■□□□ 1.28
URB1O60287 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
URB1O60287 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
URB1O60287 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.05■■□□□ 1.28
URB1O60287 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
URB1O60287 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
URB1O60287 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.05■■□□□ 1.28
URB1O60287 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
URB1O60287 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
URB1O60287 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
URB1O60287 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
URB1O60287 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
URB1O60287 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
URB1O60287 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
URB1O60287 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
URB1O60287 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.03■■□□□ 1.28
URB1O60287 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
URB1O60287 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
URB1O60287 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
URB1O60287 AP004833.2-201ENST00000532228 1454 ntBASIC23.02■■□□□ 1.28
URB1O60287 RPS2P7-201ENST00000447334 885 ntBASIC23.01■■□□□ 1.27
URB1O60287 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
URB1O60287 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
URB1O60287 ST7-AS1-201ENST00000456775 1889 ntBASIC23.01■■□□□ 1.27
URB1O60287 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
URB1O60287 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
URB1O60287 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.01■■□□□ 1.27
URB1O60287 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.01■■□□□ 1.27
URB1O60287 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.01■■□□□ 1.27
URB1O60287 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
URB1O60287 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
URB1O60287 AL136116.3-201ENST00000402907 1138 ntBASIC23■■□□□ 1.27
URB1O60287 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 AC026271.2-201ENST00000428091 497 ntBASIC22.99■■□□□ 1.27
URB1O60287 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.99■■□□□ 1.27
URB1O60287 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.99■■□□□ 1.27
URB1O60287 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
URB1O60287 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms