Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.12■■□□□ 1.29
FOXS1O43638 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXS1O43638 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.12■■□□□ 1.29
FOXS1O43638 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXS1O43638 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
FOXS1O43638 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXS1O43638 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXS1O43638 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.1■■□□□ 1.29
FOXS1O43638 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXS1O43638 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXS1O43638 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
FOXS1O43638 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.1■■□□□ 1.29
FOXS1O43638 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
FOXS1O43638 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
FOXS1O43638 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
FOXS1O43638 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXS1O43638 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXS1O43638 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
FOXS1O43638 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
FOXS1O43638 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
FOXS1O43638 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
FOXS1O43638 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
FOXS1O43638 AL121749.1-202ENST00000609313 2153 ntBASIC23.07■■□□□ 1.28
FOXS1O43638 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
FOXS1O43638 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
FOXS1O43638 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
FOXS1O43638 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
FOXS1O43638 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
FOXS1O43638 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXS1O43638 AC129492.7-201ENST00000622992 756 ntBASIC23.06■■□□□ 1.28
FOXS1O43638 AC012354.3-201ENST00000623734 483 ntBASIC23.06■■□□□ 1.28
FOXS1O43638 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXS1O43638 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
FOXS1O43638 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXS1O43638 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXS1O43638 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXS1O43638 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
FOXS1O43638 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
FOXS1O43638 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.04■■□□□ 1.28
FOXS1O43638 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXS1O43638 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
FOXS1O43638 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXS1O43638 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.03■■□□□ 1.28
FOXS1O43638 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
FOXS1O43638 AC004987.1-201ENST00000428627 508 ntBASIC23.02■■□□□ 1.28
FOXS1O43638 SPCS2P3-201ENST00000500401 656 ntBASIC23.02■■□□□ 1.28
FOXS1O43638 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
FOXS1O43638 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
FOXS1O43638 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXS1O43638 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXS1O43638 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
FOXS1O43638 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXS1O43638 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
FOXS1O43638 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
FOXS1O43638 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXS1O43638 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
FOXS1O43638 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
FOXS1O43638 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXS1O43638 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
FOXS1O43638 ATP5G2P3-201ENST00000429083 425 ntBASIC23■■□□□ 1.27
FOXS1O43638 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
FOXS1O43638 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
FOXS1O43638 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXS1O43638 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
FOXS1O43638 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.99■■□□□ 1.27
FOXS1O43638 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXS1O43638 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXS1O43638 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXS1O43638 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXS1O43638 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
FOXS1O43638 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
FOXS1O43638 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXS1O43638 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.99■■□□□ 1.27
FOXS1O43638 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
FOXS1O43638 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXS1O43638 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXS1O43638 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXS1O43638 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
FOXS1O43638 DUX4L9-201ENST00000449051 1259 ntBASIC22.98■■□□□ 1.27
FOXS1O43638 AL033527.3-201ENST00000566366 1196 ntBASIC22.98■■□□□ 1.27
FOXS1O43638 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
FOXS1O43638 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
FOXS1O43638 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.98■■□□□ 1.27
FOXS1O43638 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXS1O43638 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXS1O43638 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXS1O43638 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
FOXS1O43638 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXS1O43638 TSPY13P-201ENST00000338964 914 ntBASIC22.97■■□□□ 1.27
FOXS1O43638 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
FOXS1O43638 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXS1O43638 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXS1O43638 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.97■■□□□ 1.27
FOXS1O43638 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.97■■□□□ 1.27
FOXS1O43638 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXS1O43638 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXS1O43638 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FOXS1O43638 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXS1O43638 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
FOXS1O43638 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms