Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
AP3D1O14617 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.58■■□□□ 1.21
AP3D1O14617 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.58■■□□□ 1.21
AP3D1O14617 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.58■■□□□ 1.21
AP3D1O14617 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
AP3D1O14617 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
AP3D1O14617 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
AP3D1O14617 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
AP3D1O14617 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
AP3D1O14617 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
AP3D1O14617 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
AP3D1O14617 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.57■■□□□ 1.2
AP3D1O14617 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.57■■□□□ 1.2
AP3D1O14617 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3D1O14617 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3D1O14617 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
AP3D1O14617 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3D1O14617 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
AP3D1O14617 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
AP3D1O14617 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
AP3D1O14617 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
AP3D1O14617 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
AP3D1O14617 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
AP3D1O14617 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
AP3D1O14617 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
AP3D1O14617 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.53■■□□□ 1.2
AP3D1O14617 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.53■■□□□ 1.2
AP3D1O14617 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
AP3D1O14617 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
AP3D1O14617 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
AP3D1O14617 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.52■■□□□ 1.2
AP3D1O14617 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.52■■□□□ 1.2
AP3D1O14617 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
AP3D1O14617 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
AP3D1O14617 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
AP3D1O14617 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.51■■□□□ 1.19
AP3D1O14617 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
AP3D1O14617 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.51■■□□□ 1.19
AP3D1O14617 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
AP3D1O14617 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.51■■□□□ 1.19
AP3D1O14617 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
AP3D1O14617 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.5■■□□□ 1.19
AP3D1O14617 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
AP3D1O14617 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
AP3D1O14617 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
AP3D1O14617 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
AP3D1O14617 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
AP3D1O14617 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
AP3D1O14617 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.5■■□□□ 1.19
AP3D1O14617 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.5■■□□□ 1.19
AP3D1O14617 AL359258.2-201ENST00000564063 1566 ntBASIC22.5■■□□□ 1.19
AP3D1O14617 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.49■■□□□ 1.19
AP3D1O14617 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
AP3D1O14617 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
AP3D1O14617 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.49■■□□□ 1.19
AP3D1O14617 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
AP3D1O14617 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
AP3D1O14617 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
AP3D1O14617 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
AP3D1O14617 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AP3D1O14617 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
AP3D1O14617 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
AP3D1O14617 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
AP3D1O14617 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
AP3D1O14617 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
AP3D1O14617 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
AP3D1O14617 AC020928.2-201ENST00000588717 2197 ntBASIC22.45■■□□□ 1.18
AP3D1O14617 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
AP3D1O14617 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
AP3D1O14617 MIR639-201ENST00000384974 98 ntBASIC22.44■■□□□ 1.18
AP3D1O14617 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.44■■□□□ 1.18
AP3D1O14617 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms