Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHL1O00533 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.67■■■□□ 2.66
CHL1O00533 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHL1O00533 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHL1O00533 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CHL1O00533 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHL1O00533 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.66■■■□□ 2.66
CHL1O00533 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHL1O00533 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CHL1O00533 AL033527.3-201ENST00000566366 1196 ntBASIC31.66■■■□□ 2.66
CHL1O00533 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CHL1O00533 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CHL1O00533 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CHL1O00533 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHL1O00533 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CHL1O00533 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CHL1O00533 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
CHL1O00533 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.64■■■□□ 2.66
CHL1O00533 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CHL1O00533 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.64■■■□□ 2.66
CHL1O00533 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.64■■■□□ 2.66
CHL1O00533 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.63■■■□□ 2.65
CHL1O00533 TSPY13P-201ENST00000338964 914 ntBASIC31.63■■■□□ 2.65
CHL1O00533 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CHL1O00533 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.63■■■□□ 2.65
CHL1O00533 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CHL1O00533 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.62■■■□□ 2.65
CHL1O00533 DUX4L9-201ENST00000449051 1259 ntBASIC31.62■■■□□ 2.65
CHL1O00533 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.62■■■□□ 2.65
CHL1O00533 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CHL1O00533 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CHL1O00533 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CHL1O00533 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CHL1O00533 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CHL1O00533 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CHL1O00533 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CHL1O00533 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CHL1O00533 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.59■■■□□ 2.65
CHL1O00533 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.58■■■□□ 2.65
CHL1O00533 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CHL1O00533 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CHL1O00533 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CHL1O00533 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.58■■■□□ 2.65
CHL1O00533 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CHL1O00533 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.57■■■□□ 2.65
CHL1O00533 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
CHL1O00533 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
CHL1O00533 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHL1O00533 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHL1O00533 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.57■■■□□ 2.64
CHL1O00533 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHL1O00533 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.57■■■□□ 2.64
CHL1O00533 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CHL1O00533 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.57■■■□□ 2.64
CHL1O00533 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CHL1O00533 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHL1O00533 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CHL1O00533 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CHL1O00533 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
CHL1O00533 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.56■■■□□ 2.64
CHL1O00533 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.55■■■□□ 2.64
CHL1O00533 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.55■■■□□ 2.64
CHL1O00533 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CHL1O00533 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.54■■■□□ 2.64
CHL1O00533 DUX4L18-201ENST00000553347 1267 ntBASIC31.54■■■□□ 2.64
CHL1O00533 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.54■■■□□ 2.64
CHL1O00533 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHL1O00533 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHL1O00533 AL121749.1-202ENST00000609313 2153 ntBASIC31.53■■■□□ 2.64
CHL1O00533 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHL1O00533 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CHL1O00533 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.51■■■□□ 2.64
CHL1O00533 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.51■■■□□ 2.63
CHL1O00533 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CHL1O00533 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CHL1O00533 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CHL1O00533 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHL1O00533 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms