Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHKB-CPT1BH3BT56 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHKB-CPT1BH3BT56 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHKB-CPT1BH3BT56 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHKB-CPT1BH3BT56 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CHKB-CPT1BH3BT56 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CHKB-CPT1BH3BT56 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CHKB-CPT1BH3BT56 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHKB-CPT1BH3BT56 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHKB-CPT1BH3BT56 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHKB-CPT1BH3BT56 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHKB-CPT1BH3BT56 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHKB-CPT1BH3BT56 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHKB-CPT1BH3BT56 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CHKB-CPT1BH3BT56 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 NFIC-211ENST00000641145 8399 ntBASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CHKB-CPT1BH3BT56 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHKB-CPT1BH3BT56 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CHKB-CPT1BH3BT56 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 AC012676.1-201ENST00000574705 1949 ntBASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CHKB-CPT1BH3BT56 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms